Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05704 ATGGAACCTTTGGACGATTCAGATGCGCAACTCGAACGAGTTGACTCTGATCAGTTAACGTCCACAAGCTCCGGTTCATGCATTTCCTCCGTATTCAGCTCTGACGATTTCCGTAACTTCAACAGTTCCGGCTACATTTCCTCTATCAGTAGCGGTTCAGGTGAGATTTCGACATTCACGGTTAACCGTCTGATTCTTGCACCTCCGTTGATCGCTGTGTCCAGTGAAGCTGATAACGAGACTACCGCTCCGGAAGAGGTTGTGATGAAGGCAGTGAGAGAGAAATGCGTGGGAAGGAATAACAAAGGAGTGAATTGGGGACATACTTCAGTGATTGGGAGGCGGAAAGAGATGGAGGACGCTATCGCCGTTATTCCTGGATTTATGTCCCGCACTTGCGATCACGTTGGCGGTTGCACAGCTCCCGGTTCTAGATCCTCCGGTGAGATCAGTCCTGTTCACTTCTTCGGCGTTTACGACGGTCACGGTGGCTCTCAGGTTGCTAAATTTTGTGCCAAGCGAATGCACAGTGTTATATCAGAGGAGTGGGAGCGAGAAATAGCAGATGGTGCTGAATGGCAGAGAAAGTGGGAAGCTGTATTTGCTAATGGCTTTGAGAGGACTGACAAAGAAATTGAATCAGATGCAGTTGCACCAGAAATGGTTGGATCTACTGCCTCAGTGGTTGTTCTATCTGGTTGCCAGATTATTACATCAAACTGTGGTGACTCAAGGGCGGTTCTTTGCCGCAGGACTGAAACAGTCCCATTGACTGTGGATCAAAAGCCTGATAGAGAGGATGAACTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCAATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATCCCGGTTCCAGAGATTTCTTTTACAACAAGAACTGACGAGGATGAGTGTTTAATTTTGGCAAGTGATGGACTTTGGGACGTAATGACGAATGAGGAGGTAGGAGAAGTAGCGCGCCGCATTCTAAGAAGGCGCCGCAGATCTATGTCAATGGAGGAAATATCTCCAACACAAATTGTTGCTGATAGTCTCACTGAAATTGCCTGTGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCTGCAAAGACCTCCTTCAATTTCCTAG 1215 0.4642 MEPLDDSDAQLERVDSDQLTSTSSGSCISSVFSSDDFRNFNSSGYISSISSGSGEISTFTVNRLILAPPLIAVSSEADNETTAPEEVVMKAVREKCVGRNNKGVNWGHTSVIGRRKEMEDAIAVIPGFMSRTCDHVGGCTAPGSRSSGEISPVHFFGVYDGHGGSQVAKFCAKRMHSVISEEWEREIADGAEWQRKWEAVFANGFERTDKEIESDAVAPEMVGSTASVVVLSGCQIITSNCGDSRAVLCRRTETVPLTVDQKPDREDELLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEISFTTRTDEDECLILASDGLWDVMTNEEVGEVARRILRRRRRSMSMEEISPTQIVADSLTEIACGRNSKDNISIIVVDLKSKRKRLQRPPSIS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05704 404 PANTHER PROTEIN PHOSPHATASE 86 390 IPR015655 GO:0004722|GO:0006470
Trre7g05704 404 SMART PP2C_4 97 388 IPR001932 -
Trre7g05704 404 Pfam Protein phosphatase 2C 113 383 IPR001932 -
Trre7g05704 404 SUPERFAMILY PP2C-like 99 391 IPR036457 -
Trre7g05704 404 CDD PP2Cc 107 390 IPR001932 -
Trre7g05704 404 ProSiteProfiles PPM-type phosphatase domain profile. 105 390 IPR001932 -
Trre7g05704 404 FunFam Protein phosphatase 2C 51 98 398 - -
Trre7g05704 404 MobiDBLite consensus disorder prediction 1 25 - -
Trre7g05704 404 Gene3D - 94 399 IPR036457 -
Trre7g05704 404 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05704 Trre-Chr7 62255153 62261761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05704 106 400 PP2C-type Phosphatase Gene Family AT4G26080 52.063 5.76e-102 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05704 K14497 - gmx:100793293 596.275