Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05684 ATGAAGATCGAGGAATTGGAGGATGCAGAGTGTAGTAGAGATGAAGAAGAGAATTCCGAGAGGCAAATTGTTATGGTTGATGCAAAGAGAGCGTTGGTTGGTGCAGGTGCACGGATCCTATTTTATCCAACACTTTTGTATAACGTGGTTCGTAATAAAATTGAAGCTGAGTTCAGGTGGTGGGATCAAATTGATGAGTTTTTGTTGCTGGGCGCAGTCCCGTTCCCTAAAGATGTTCCTCAATTGAAGAACCTTGGTGTTGGCGGTGTGATTACTTTGAATGAACCTTATGAAACTTTGGTACCATCTTCATTATATCGTGCTCACGGGATTGATCATTTGGTAATTCCCACAAGGGATTATCTCTTTGCTCCCTCATTTGTGGATATCAACCGGGCAGTGCAGTTCATTCATTATAATGCAACTTGTGGTAAAACAACTTATGTTCACTGTAAAGCTGGGAGGGGGAGGAGTACAACAATTGTGCTTTGTTATTTGGTTGAATACAAGCACATGACACCTGCTGCTGCCCTGGATTATGTGCGGTCTCGAAGACCTAGAGTGCTACTGGCACCATCACAGTGGAAGGCTGTTCAAAACTATAACAAGCAAAGACCTGTTCAAAACAATAACAAGCAAATATCTGTTCAAAACTATAACAAGCAAAGGCCGTGTTCTTTACCTTACTCTCCCTCTGGGGACACGGTTCTCATAACCAAAGATGATCTTGAAGGCTATCATAGCACATCTGATACTAGTATGGAGCTGGCTATTGTTCCTAAAGTGGCAAAGACTAAACCCATGATAGCAAGACTATCTTGCCTGTTCGCATCCTTAAAAGTAGCCGGTAGTAGTGTACCAATGACAAGGCGGCTGCCAGTTTCAGAGTCACGTGCTTGCTAA 903 0.4297 MKIEELEDAECSRDEEENSERQIVMVDAKRALVGAGARILFYPTLLYNVVRNKIEAEFRWWDQIDEFLLLGAVPFPKDVPQLKNLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSFVDINRAVQFIHYNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALDYVRSRRPRVLLAPSQWKAVQNYNKQRPVQNNNKQISVQNYNKQRPCSLPYSPSGDTVLITKDDLEGYHSTSDTSMELAIVPKVAKTKPMIARLSCLFASLKVAGSSVPMTRRLPVSESRAC 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05684 300 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 203 IPR029021 -
Trre7g05684 300 CDD PTPMT1 60 204 IPR044596 GO:0004721
Trre7g05684 300 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Trre7g05684 300 Gene3D Protein tyrosine phosphatase superfamily 60 208 IPR029021 -
Trre7g05684 300 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Trre7g05684 300 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 278 - -
Trre7g05684 300 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Trre7g05684 300 FunFam Dual specificity phosphatase domain protein 60 207 - -
Trre7g05684 300 Pfam Dual specificity phosphatase, catalytic domain 80 203 IPR000340 GO:0008138|GO:0016311
Trre7g05684 300 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05684 Trre-Chr7 62132017 62133833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05684 19 288 Protein tyrosine phosphatase (PTP) family AT2G35680 53.716 4.31e-104 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05684 - - gmx:100817410 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05684 7 62132017 62133833 Trre7g05684 7 62132017 62133833 ECH