Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05655 ATGAATAGACAAAAGGATCATCATTATGATGAAGATATGAGTTCTTCTTCTTCTAAGGTTATTGTAGTTGCTGTTAAAGCTTCAAAAGATATTTCAAGAACTGCTTTGGTTTGGGCTTTGACTCATGTTGTTCAACCTGGAGATTGCATTAAGCTTTTGGTTATCATTCCTGCACATTCATCAAGAAAAAAAGTATGGGGGTTTTCAAGATTTACTACTGATTGTGCCACTAATCATTGGACATCGCGATTAGGAACAGTTTCAGACCAGAAAGAAGATATAACAAATTCATGTTCTCAATTAGTGCTTCAACTCCATGATTTTTATGATCCAGAGAAGATAAAGATTAGAGTGAAGATTCTTTCTGGTTCTTTGTGTGGCGCGGTCGCTGCTGAAACCAAGAGAGTGCAGTCAAGCTGGGTTATATTGGACAGAAAATTGAAAGGTGAAAAGAAATACTGTATGGACGAGCTGCATTGCAATATTGTAATAATGAAGCATTCTCACCCGAAGATTCTACGCTTGAATTTAAATAGTTTGCCTAACAAGGAACTTGGCAGAGATTGTGCATTTTCGTTGGAGCCGAATACATACACAAGAAACTTAAAAGACAATTTTGAACATTCAGATATAATTAAAGGTCCAGCAGTTACTCCTGCTAGTAGTCCAGAACAAGGATCACCACCGTTGACTGTAACTGATGTTGGAACACCGTCGATATCGAGCTCAGATCCTGGAACATCGCCATTTTTCCACTCTGATAATTACGAAAGACGGAGGAGATGTTTTCCCTTTGTTATTCATGAGGGACTGACAAACCTCGAGGATATTGAATCTGACTCGGAGAGTGAAAAGCTAAGTTCATCGTCCAAAAGTTCGTCTTTTCAGCCATGGATTTCAAATGTAATTTGTGTAGACGGTGAATTCTCAAAACACGAAGAAAATATTAAAAGATCTAGCGATAAGTCTTTGGTTTCTACCTATGAATCTTTGCTTCAGAAATTGACGATGTTGGATCAAGATCATATCTATGGAACGCCTAATTGTAAAATTGATGTGAACTTGAGCAAGAGTGTTAGAGAAGCAATTTCACTAGCCAGAAATGCACCTCATGGACCTCCTCCATTGTGCTCTATTTGTCAACACAAAGCACCTGCATTTGGGAATCCTCCAAGGTGGTTCACGTTTGCGGAACTACAGCTCGCCACAGGTGGTTTTTCACAAGCAAACTTCTTGGCCGAAGGTGGTTTTGGTTCTGTACACCGTGGTGTCTTACCAGATGGACAAGTTGTTGCTGTCAAGCAGTATAAATTAGCCAGTACTCAAGGAGATAAAGAATTTTGCTCAGAAGTAGAGGTCTTAAGCTGCGCACAACACCGCAATGTTGTGATGCTAATTGGTTTCTGTGTTGAGGATGGAAGAAGATTGCTAGTTTATGAGTATATCTGCAACGGATCACTCGATTCTCATCTTTACGGAAGAATGCAGAATGTGCTGGATTGGTCTGCACGCCAAAAAATTGCGGTTGGAGCAGCTCGTGGTTTGAGATATCTTCATGAAGAATGTAGAGTTGGTTGCATTGTACACCGTGATTTGCGACCTAACAATATCCTCCTCACTCACGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAGCCAGATGGAGATATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTAGCACCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTATACTCATTTGGGATAGTATTATTGGAGCTTGTGACAGGTCGGAAAGCTGTGGATATTAGCCGTCCGAGGGGCCAACAATGCCTTAGTGAATGGGCACGTCCGTTGCTTGAAGAACAGGCCATTCATAAACTTGTAGATCCGAGCATAGGAAACTCCTATGTTGATCAAGAGGTTTATCGCATGATGCAGTGTTCCTCTATGTGCATTCGACGGGATCCTCATTTAAGGCCTCGAGTGTCTCAGGTGCTCAAGATGCTTGAAGGTGACATTCTCATGTGA 2049 0.4104 MNRQKDHHYDEDMSSSSSKVIVVAVKASKDISRTALVWALTHVVQPGDCIKLLVIIPAHSSRKKVWGFSRFTTDCATNHWTSRLGTVSDQKEDITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAETKRVQSSWVILDRKLKGEKKYCMDELHCNIVIMKHSHPKILRLNLNSLPNKELGRDCAFSLEPNTYTRNLKDNFEHSDIIKGPAVTPASSPEQGSPPLTVTDVGTPSISSSDPGTSPFFHSDNYERRRRCFPFVIHEGLTNLEDIESDSESEKLSSSSKSSSFQPWISNVICVDGEFSKHEENIKRSSDKSLVSTYESLLQKLTMLDQDHIYGTPNCKIDVNLSKSVREAISLARNAPHGPPPLCSICQHKAPAFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRMQNVLDWSARQKIAVGAARGLRYLHEECRVGCIVHRDLRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDISRPRGQQCLSEWARPLLEEQAIHKLVDPSIGNSYVDQEVYRMMQCSSMCIRRDPHLRPRVSQVLKMLEGDILM 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05655 682 SUPERFAMILY Protein kinase-like (PK-like) 387 677 IPR011009 -
Trre7g05655 682 CDD STKc_IRAK 412 678 - -
Trre7g05655 682 FunFam Dual-specific kinase DSK1-like 12 166 - -
Trre7g05655 682 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Trre7g05655 682 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05655 682 PANTHER OS01G0750732 PROTEIN 164 680 - -
Trre7g05655 682 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 378 481 - -
Trre7g05655 682 Gene3D Transferase(Phosphotransferase) domain 1 482 680 - -
Trre7g05655 682 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 482 682 - -
Trre7g05655 682 SMART tyrkin_6 406 676 IPR020635 GO:0004713|GO:0006468
Trre7g05655 682 Pfam Protein tyrosine and serine/threonine kinase 410 676 IPR001245 GO:0004672|GO:0006468
Trre7g05655 682 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Trre7g05655 682 MobiDBLite consensus disorder prediction 213 251 - -
Trre7g05655 682 MobiDBLite consensus disorder prediction 220 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05655 Trre-Chr7 61895054 61898359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05655 368 672 Trihelix Transcription Factor Family AT1G68690 51.780 7.29e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Trre7g05655 PK_Tyr_Ser-Thr 8.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05655 - - aprc:113855006 1158.28