Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05653 ATGGGGAGAAGAAAATGTTCACATTGTGGTAAGATAGGACATAATTGTAGGACATGCACATCCTTCACTCTTGGAGTTGGAGGACTTCGTCTCTTTGGTGTCCAACTATCATCTAATAATAATTCTACCATCATCAAAAAAAGCTTTAGCATGGACAATTTTCCTTCACCATCTTCTCCATCTTCTTCATTCTCTTCATCAACATCATTAACCAATATTGATCATAATCATCATCATCATCATCATCATCACAAATCTACCTCTACTAATATTGCTTATCTATCAGATTGTTTTATAGGTCCACCTCAAGAGAGGAAAAAAGGAGTTCCATGGACAGAAGAGGAGCATAGAATGTTTCTAGTTGGACTAGAGAAGATGGGAAAAGGAGATTGGAGAGGTATCTCTAAAAACTTCGTCCCCACGAGAACCCCTACACAAGTCGCGAGTCATGCTCAAAAATACTTTCTCCGATTGACTACTATCAATAACAAGAAGCGGCGTTCAAGTCTCTTTGACTTGGTTGGGAGAAAGAACACTACTAATTCAGTAGTTTTGGGTCATAAATTAAAGGATATGTGTAAATGTGAAGTTGAGATTAATGATGGCACCACTTTCGTTAAACAAGAAGTAGTGAAATCAGATAAGCAAGAAATTAATTACTCTCAAGTTAATTGGCTAAATCATCACTCTTCAAATAATGCAACAGTGCCTAATTTGGACCTCACACTTGCAATAGCATCCCCTAAGAAGACTAATAAGACCACTCCAGATGGCCCATTACTTTTTGGCCCAATTAGTGTCACTTAA 807 0.3755 MGRRKCSHCGKIGHNCRTCTSFTLGVGGLRLFGVQLSSNNNSTIIKKSFSMDNFPSPSSPSSSFSSSTSLTNIDHNHHHHHHHHKSTSTNIAYLSDCFIGPPQERKKGVPWTEEEHRMFLVGLEKMGKGDWRGISKNFVPTRTPTQVASHAQKYFLRLTTINNKKRRSSLFDLVGRKNTTNSVVLGHKLKDMCKCEVEINDGTTFVKQEVVKSDKQEINYSQVNWLNHHSSNNATVPNLDLTLAIASPKKTNKTTPDGPLLFGPISVT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05653 268 ProSiteProfiles SANT domain profile. 111 159 IPR017884 -
Trre7g05653 268 SMART sant 107 157 IPR001005 -
Trre7g05653 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 103 159 IPR017930 -
Trre7g05653 268 ProSiteProfiles Myb-like domain profile. 103 155 IPR001005 -
Trre7g05653 268 PANTHER TRANSCRIPTION FACTOR KUA1 3 237 - -
Trre7g05653 268 CDD SANT 110 155 IPR001005 -
Trre7g05653 268 SUPERFAMILY Homeodomain-like 104 159 IPR009057 -
Trre7g05653 268 MobiDBLite consensus disorder prediction 56 85 - -
Trre7g05653 268 Gene3D - 109 162 - -
Trre7g05653 268 MobiDBLite consensus disorder prediction 56 72 - -
Trre7g05653 268 FunFam transcription factor MYB1R1 109 160 - -
Trre7g05653 268 NCBIfam myb-like DNA-binding domain, SHAQKYF class 106 157 IPR006447 GO:0003677
Trre7g05653 268 Pfam Myb-like DNA-binding domain 110 155 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05653 Trre-Chr7 61880367 61881650 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre7g05653 Myb_DNA-binding 6.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05653 - - cam:101500241 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05653 7 61880367 61881650 Trre7g05653 7 61880367 61881650 ECH