Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05647 ATGGCAGGTACGATGAAAAAAGTCGACAAGATTCGTCAAATCGTTCGTTTGAAACAACTCATGACACGCTGGAAACAAATCAGTCTCCGTCGTCGTTCGCTTCGTTCCGAACCTGAAGAAACAACACCAACAATAACAACCGAATCATGTGTTACTCCTCGAAGACAACCACCTTCAGGTTTTGTCTTCGTTTATGTTGGATCGGAACGACACCGTTTTGCTATCCCTGCTCGGTTTCTTAACTTTCCTGTTTTCGCTGGTCTTCTCGATGTAACCGAGGAAGAATTTGGTTTAAGAGGTAACGGCGGTTTAGTTCTTCCTTGCCACGTGGATTTTTTCACGGAAATCGTTAAACGTCTTCATAAGAATGAACACAAGTATGGGAAATTTTCTTTGGAAGATTTTGTTAAATTTTTTTCTGACGTGGCGGTTGATTCTTATTGTAAAGAAAAAGAAAACGTCGTCGTTTTGACTCCTTTGTTGCAGAAGGCTTCAGTCTAG 501 0.4132 MAGTMKKVDKIRQIVRLKQLMTRWKQISLRRRSLRSEPEETTPTITTESCVTPRRQPPSGFVFVYVGSERHRFAIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCHVDFFTEIVKRLHKNEHKYGKFSLEDFVKFFSDVAVDSYCKEKENVVVLTPLLQKASV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05647 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 115 IPR003676 GO:0009733
Trre7g05647 166 MobiDBLite consensus disorder prediction 34 53 - -
Trre7g05647 166 MobiDBLite consensus disorder prediction 39 53 - -
Trre7g05647 166 Pfam Auxin responsive protein 23 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05647 Trre-Chr7 61816665 61817165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05647 7 137 Calmodulin-binding Proteins AT3G43120 31.579 5.16e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05647 K14488 - gmx:100793118 191.815