Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05631 ATGAACAATAAAACCATATTCATTCTATTGTTATGTCTTGTTTCATCTTATGCTGAGTCTGACTCTGAATTGCTCCTCAAGGTAAAGGACAATCTAGAAAAAAACGACAATGTATTGACATCATGGAACACAACAACAATTCCTTGTGACGGCGATCATAGTAATTGGTACGGTGTTCGTTGTTATCAAGGAAAAGTTTGGGGATTGAAGCTTGAGAATATGGGGCTAAAAGGGGTCATTGATGTTGATTCTCTTAGGCAATTACCATATCTTAGAACTATTAGTTTCATGAATAATGATTTTGAAGGTGGTTGGCCTGAGATTAACAAACTTGTTGGTCTTAAATCGATTTTTCTTTCGAATAACAAATTTTCTGGAGACATTCCTGGTGATGCTTTTGAAGGTATGATGTGGTTGAAGAAAATTCATTTGTCGAATAATCAGTTTACAGGTGTTATTCCACCTTCTGTGGTTTTGTTACCAAAGCTTATGGAATTGAGATTGGATGGAAACAAATTCATTGGTCCTCTTCCTCATCTTAGACAATCCAGATTGAAATCATTCAATGTAGCTAATAATCAGTTGCATGGACAAATACCAACCACACTTAGTAAAATCGCCGTTTCTTCCTTTTCTGGTAATGAAGGTTTATGTGGAGCTCCATTGGCTGCATGTACTGCAAAGAAGCCATCAATTGCAAGTATTTGTGTGGTTGCTGTGGTTGTTTGTGTGGCACTGATTGTGATCGGAGTCACAATATTTTTCATCCTTCATCGGCGAAGAAACCAGGAGCCATCACCAGGTCTAGAGAATCCTCCTTCAGGCCACCACAACAACAAAATAGGACGAGGAGATATTGGTAATGATAGTATGAAATCAACAAGATCAGTGAGTTCCACTCACAGCAGAAGAGGTGATCAAATGAAGTTATCTTTTATAAAAGATGACAGAGAAAGATTTGATTTGCAAGAGTTGTTGAGAGCTAATGCTGAGATTTTGGGAAGTGGTTGTTATAGTTCTTCTTATAAGGCTTCTTTGACAAGTGGAGCAATAGTTGTGAAGAGGTTTAAGCAAATGAATAATGTAGGGAAGGAAGAGTTTCAAGAACATATGAGAAGGATAGGAAGATTGAATCATCAAAATTTGATTCCTCTTGTGGCTTATTATTATAGAAAAGAGGAGAAGCTTTTGGTTACTGACTATGTTCAAAATGGAAGTCTCGCTGTTCGCCTTCATGGACATCAAGCACTAGGTGAACCAAGCCTTGATTGGCCAATAAGATTGAAGATTGTGAAAGGAATAGCAAAAGGACTTGAATATCTATACAAAGATATGCCAAGCCTAATTGCACCACATGGAAATCTCAAATCCTCAAATGTACTTCTAACTGAAACATTTGAACCAATCCTCACAGATTATGGATTAGTACCTGTAACAAACCAAGAAATGGCAAAGGACATAATGGTAATATACAAATCACCAGAATATTTACAACAAGGAAGAATAACAAAGAAAAGTGATGTTTGGTGTCTTGGAATATTAATATTGGAAATTTTAACTGGTAAATTTCCAGCTACATTTTTACAACAAGGTAAAGGAAGTGAGGTGAGTTTAGCAAATTGGGTTATTTCAGTAGTACCTGAGGAATGGAATAGTTCAGTGTTTGATAAAGAAATGGGTGAAACAAAGAATGGTGAGAGTGAGATGGAAAAACTTTTGAAAATTGCATTGAGTTGTTGTGAAGGTGATGTTGATAAAAGATGTGATTTGAAAGAAGCTGTAGAGAAAATTCAACAAGTGAAAGAGAGAGATGTTCATGATGATGATGATGGTGATGACAACATTTTTACAACTGACATGAAATGA 1866 0.3617 MNNKTIFILLLCLVSSYAESDSELLLKVKDNLEKNDNVLTSWNTTTIPCDGDHSNWYGVRCYQGKVWGLKLENMGLKGVIDVDSLRQLPYLRTISFMNNDFEGGWPEINKLVGLKSIFLSNNKFSGDIPGDAFEGMMWLKKIHLSNNQFTGVIPPSVVLLPKLMELRLDGNKFIGPLPHLRQSRLKSFNVANNQLHGQIPTTLSKIAVSSFSGNEGLCGAPLAACTAKKPSIASICVVAVVVCVALIVIGVTIFFILHRRRNQEPSPGLENPPSGHHNNKIGRGDIGNDSMKSTRSVSSTHSRRGDQMKLSFIKDDRERFDLQELLRANAEILGSGCYSSSYKASLTSGAIVVKRFKQMNNVGKEEFQEHMRRIGRLNHQNLIPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGHQALGEPSLDWPIRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLTETFEPILTDYGLVPVTNQEMAKDIMVIYKSPEYLQQGRITKKSDVWCLGILILEILTGKFPATFLQQGKGSEVSLANWVISVVPEEWNSSVFDKEMGETKNGESEMEKLLKIALSCCEGDVDKRCDLKEAVEKIQQVKERDVHDDDDGDDNIFTTDMK 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05631 621 Pfam Leucine rich repeat N-terminal domain 19 61 IPR013210 -
Trre7g05631 621 Pfam Protein kinase domain 330 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05631 621 FunFam Pollen receptor-like kinase 1 402 611 - -
Trre7g05631 621 ProSiteProfiles Protein kinase domain profile. 327 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05631 621 FunFam pollen receptor-like kinase 1 295 401 - -
Trre7g05631 621 SUPERFAMILY L domain-like 19 223 - -
Trre7g05631 621 SUPERFAMILY Protein kinase-like (PK-like) 331 598 IPR011009 -
Trre7g05631 621 Gene3D Ribonuclease Inhibitor 183 225 IPR032675 -
Trre7g05631 621 Gene3D Transferase(Phosphotransferase) domain 1 402 613 - -
Trre7g05631 621 MobiDBLite consensus disorder prediction 289 305 - -
Trre7g05631 621 MobiDBLite consensus disorder prediction 601 621 - -
Trre7g05631 621 Pfam Leucine rich repeat 113 173 IPR001611 GO:0005515
Trre7g05631 621 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 604 IPR046959 -
Trre7g05631 621 Gene3D Phosphorylase Kinase; domain 1 292 401 - -
Trre7g05631 621 MobiDBLite consensus disorder prediction 264 305 - -
Trre7g05631 621 Gene3D Ribonuclease Inhibitor 17 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05631 Trre-Chr7 61688425 61690914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05631 6 619 Receptor kinase-like Gene Family AT5G35390 52.351 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre7g05631 Pkinase 6.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05631 - - gmx:100804368 888.641