Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05618 ATGGAACATAATTTCTATCTCTCCATTCTCCTTCTCTTTGTCTCTCTCATTTCTCTCTCACTTTTTTTTCTCTTCAACAAACACAAATCTCCATGGAATTTGCCACCAGGAAAAATGGGTTATCCTATAATAGGTGAAAGTCTTGAATTTCTATCCACAGGATGGAAAGGAAAACCTGAAAAATTCATTTTTGACCGTATGATTAAATATTCATCTGAACTTTTTAAAACATCAATCTTAGGTGAACCTACGGTTGTTTTTTGTGGTGCCGCATGTAACAAGTTTTTGTTTTCAAACGAGAATAAATATGTTGTTGCATGGTGGCCAGAAAGTGTGAACAAAATATTTCCTACTACTTTGGATTCTAAGGAAGAATCTATAAAGACTAGAAAATTGCTTCCTCAATTTCTCAAACCTGAAGCTCTACAACGTTATGTTGGTATCATGGATACTATTGCTCAAAGACACTTTTCTTCTCTTTGGGAGAATAAATATCAAGTCACCGTCTACCCTTTGGCTAAGAGGTATACTTTTATGCTGGCTTGTCGTTTGTTCATGAGCATCGAGGACGAGAACCATGTAGCGAAATTTAGCGAACCATTTCATTTATTGGCGGCCGGAATCATATCGGTGCCGATCAATTTGCCCGGAACGCCATTCAACAAAGCTATAAAGGCTTCAAACTTCATAAGAATAGAGTTGCTAAAGATCATAAGGCAAAGAAAGATGGATTTAGCACAAGGAGTGGCATCACCAACACAAGATATATTGTCTCACATGTTGTTGACGCGTAATGAAAATGGAGAGTTTTTGAATGAACTTAAAATTGCAGATAAGATTCTTGGCCTTCTGATCGGAGGACATGACACTGCTAGCGCCGCATGCACTTTCATTGTTAAATATCTTGCCGAGCTACCTCACATTTATGATAAAGTCTATCAAGAGCAAATGGAAATTGCAAAATCAAAATCACCAGGAGAGGTGTTGAATTGGGATGACCTCATGAAAATGAGATACTCTTGGAATGTAGCTTGTGAAGTAATGAGAGTTGCCCCTCCACTCCAAGGAGGTTTCAGGGAAGCCATCACTGACTTTATATTCAATGGATTCTCAATTCCTAAGGGATGGAAGCTCTATTGGAGTGCAAATTCAACACATAAGAACCCAGAATGTTTTCCCATGCCAGAGAAATTTGACCCAACAAGATTTGAAGGAAATGGACCAGCTCCTTACACATTTGTACCATTTGGTGGAGGACCAAGGATGTGCCCTGGAAAAGAGTATGCAAGATTAGAAATACTAGTTTTCATGCACAATTTAGTGAAAAGGTTCAAGTGGGAAAAGTTGATTCCAAATGAGAAGATTATTGTTGATCCCTTCCCTATCCCAGCAAAGGGCCTCCCAATTCGCCTTTATCCACACAAAGCTTGA 1431 0.3871 MEHNFYLSILLLFVSLISLSLFFLFNKHKSPWNLPPGKMGYPIIGESLEFLSTGWKGKPEKFIFDRMIKYSSELFKTSILGEPTVVFCGAACNKFLFSNENKYVVAWWPESVNKIFPTTLDSKEESIKTRKLLPQFLKPEALQRYVGIMDTIAQRHFSSLWENKYQVTVYPLAKRYTFMLACRLFMSIEDENHVAKFSEPFHLLAAGIISVPINLPGTPFNKAIKASNFIRIELLKIIRQRKMDLAQGVASPTQDILSHMLLTRNENGEFLNELKIADKILGLLIGGHDTASAACTFIVKYLAELPHIYDKVYQEQMEIAKSKSPGEVLNWDDLMKMRYSWNVACEVMRVAPPLQGGFREAITDFIFNGFSIPKGWKLYWSANSTHKNPECFPMPEKFDPTRFEGNGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNLVKRFKWEKLIPNEKIIVDPFPIPAKGLPIRLYPHKA 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05618 476 FunFam Taxadiene 5-alpha hydroxylase 25 474 - -
Trre7g05618 476 SUPERFAMILY Cytochrome P450 27 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 Gene3D Cytochrome P450 25 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PANTHER CYTOCHROME P450 26 32 462 - -
Trre7g05618 476 CDD CYP90-like 66 473 - -
Trre7g05618 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Trre7g05618 476 Pfam Cytochrome P450 35 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05618 476 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05618 Trre-Chr7 61639636 61644185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05618 28 383 Cytochrome P450 AT5G36110 58.449 1.79e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05618 K20667 - ag:CBN88269 840.876