Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05609 ATGGCGAACAATTTTGATTACATTTTACTAACACTACTAATCTTCACCGTTACAGTAACAGCTTCATCTAAATCAATGGACGATGTAAAATCTTCAATCCCTCTCGTATCATTCCTCGAACGTCTTCAACAAACCGCATTCAACACATTCAACAACCATTCCAATTTCGATCCTAAAACCTACGTTGATTTACCTCTCAAATTTCCCCTTTCCGTTACCGATCACGCTTTCCAGAATCTTCCTAAATCATCAACCGGTTCAGTTTCCGTTCACGATTTGAACCGGTTTATTGAAACTTATTTTGAAGGTGCAGGTGATGATTTGGTGTACTTTGATCCAGAGGATTTTGTTCCTGTGCCTGATGATTTTTTGCCTAAAGTGAAAAACCCTGAGGTTAGAGCTTGGGCGATTAAGGTTCATTCTCTTTGGAAAAATTTGAGTAGGAAAGTTTCTAGTGAGGTGAAGACTCATCCTGAGTTTCATACTCTGCTTCCTGTTCTTGATTCTGTTGTTATTCCTGGTTCGCGATTTCGCGAAGTTTATTATTGGGATTCTTATTGGGTAATTAGGGGTTTGTTGGCAAGTAAAATGTATAAGACTGCTAAAGGTATTGTCAACAATCTCATTTCCTTCATTGAGGAATATGGGTTTGTTCTTAATGGTGCTAGAGCATACTACACTAATAGGAGCCAGCCTCCTCTTTTAAGCGCTATGATTTATGAGATATACCATAGAACTGGTGATGTGGAATTAGTTAAAAGATCTCTACCTGCACTACTAAAAGAGCATGAGTTTTGGAATTCAGATATACATAAAGTGACTGTTTCGGATGCTCAAGGTTGCACTCATACCTTAAATCGCTATTATGCAAGGTGGAACAAACCCAGACCGGAGTCGTCCATAATGGACAAGGCATCTGCTTCCAAGTTCACAACTGTTTCTGAAAAACAACAATTTTACCGTGAACTAGCATCAGCAGCGGAATCAGGATGGGATTTCAGCACAAGATGGATGAGACATCCTCCCAACTTCACAACATTGTCTACAACGTCAGTGATACCTGTTGATTTAAATGCATTTATACTCGGGATGGAACTTAATATTGCCTTCTTTGCAAATGTTACCGGAGATCATAGCACTGCCAAACGCTTCCTGCAAATTTCTGATGTTAGAAAGGAGGCAATTAACTCTATTTTCTGGAATGCAAACATGAAACAGTGGCTTGATTCCTGGCTCAGCAATACCACACATGAGAAGGTTCATGATTGGGATACTCTGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATGCTTCCCTTGTGGGTAATGTTCTCAAAAGTCTCAAAACTTCTGGACTGCTTCGTGCTGCTGGAATTGCAACTTCTTTGACTGATTCAGGACAGCAGTGGGATTTTCCAAATGGTTGGGCTCCACTTCAACACATGTTAGTTGAAGGTCTGGTAAAATCAGGGTTGGAAGAAGCAAGGTCATTGGCTGAGGAAATTGCCATCAGATGGATCACTACCAACTATATTGTTTACAAGAAAACAGATGTAATGCACGAAAAGTTTGACGTGGAGCATTGCGGAGAATTCGGAGGTGGGGGTGAATACGTACCTCAGACTGGTTTTGGCTGGTCGAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGTAAAATAGAATGTTGA 1740 0.4046 MANNFDYILLTLLIFTVTVTASSKSMDDVKSSIPLVSFLERLQQTAFNTFNNHSNFDPKTYVDLPLKFPLSVTDHAFQNLPKSSTGSVSVHDLNRFIETYFEGAGDDLVYFDPEDFVPVPDDFLPKVKNPEVRAWAIKVHSLWKNLSRKVSSEVKTHPEFHTLLPVLDSVVIPGSRFREVYYWDSYWVIRGLLASKMYKTAKGIVNNLISFIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYHRTGDVELVKRSLPALLKEHEFWNSDIHKVTVSDAQGCTHTLNRYYARWNKPRPESSIMDKASASKFTTVSEKQQFYRELASAAESGWDFSTRWMRHPPNFTTLSTTSVIPVDLNAFILGMELNIAFFANVTGDHSTAKRFLQISDVRKEAINSIFWNANMKQWLDSWLSNTTHEKVHDWDTLHQNQNVFASNFVPLWMKPFYSDASLVGNVLKSLKTSGLLRAAGIATSLTDSGQQWDFPNGWAPLQHMLVEGLVKSGLEEARSLAEEIAIRWITTNYIVYKKTDVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRKIEC 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05609 579 SUPERFAMILY Six-hairpin glycosidases 53 572 IPR008928 GO:0005975
Trre7g05609 579 ProSitePatterns Trehalase signature 2. 480 489 IPR018232 GO:0004555|GO:0005991
Trre7g05609 579 PANTHER TREHALASE 33 577 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 Pfam Trehalase 55 570 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 Gene3D - 42 577 IPR012341 GO:0005975
Trre7g05609 579 PRINTS Glycosyl hydrolase family 37 signature 320 337 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 PRINTS Glycosyl hydrolase family 37 signature 553 566 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 PRINTS Glycosyl hydrolase family 37 signature 473 489 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 PRINTS Glycosyl hydrolase family 37 signature 352 369 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 PRINTS Glycosyl hydrolase family 37 signature 285 302 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 PRINTS Glycosyl hydrolase family 37 signature 395 411 IPR001661 GO:0004555|GO:0005991
Trre7g05609 579 PRINTS Glycosyl hydrolase family 37 signature 215 233 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05609 Trre-Chr7 61545049 61549805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05609 29 579 Trehalose Biosynthesis Gene Families AT4G24040 57.762 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05609 K01194 - gmx:547539 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05609 7 61545049 61549805 Trre7g05609 7 61545049 61549805 ECH