Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05584 ATGGAAGATACTGAAACAAAAGCAAGAATCGAAGAAACAGTTCTTAAGATCCTCCACGAATCAAACATGGATGAGGTAACTGAATCAAAGATCCGAAAACAAGCCTCCACCGAATTGGACCTAAACCTAAACCAGCCTCCATTCAAAGCTTTGGTGAAACAAATCATCGAAGATTTTCTTGTGGAGAAGCAGCAACAACAACAAAAGGAAGAAGAAGAAAAGCAGCGAGAGAAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGAAAAGCAAGAGGTTAAACAAAAAGGTGTTTCCAGCAAAAGCAATGTCTACGTCGATTCTGGCGATCTCGTCATTTGTGAGCTTACGAAAAAGAGAAAGGTGACCATTCAGGATTTCAAAGGGAGAAGGTATGTCTCCATTCGCGAGTTTTACACCAAGGATGGCAAGGAACTTCCTTCTAATAAAGGAATAAGTTTGTCTGGGGAGCAGTGGGAAGTCCTTAAGAATTGTGTGCCTGCCATAGAAGAAGCGATCGAGAAAATGGAGTCGCGTATTTAA 543 0.4088 MEDTETKARIEETVLKILHESNMDEVTESKIRKQASTELDLNLNQPPFKALVKQIIEDFLVEKQQQQQKEEEEKQREKEEEEEVEEEEEKQEVKQKGVSSKSNVYVDSGDLVICELTKKRKVTIQDFKGRRYVSIREFYTKDGKELPSNKGISLSGEQWEVLKNCVPAIEEAIEKMESRI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05584 180 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Trre7g05584 180 SUPERFAMILY DEK C-terminal domain 4 57 - -
Trre7g05584 180 Pfam DEK C terminal domain 5 60 IPR014876 -
Trre7g05584 180 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 179 IPR045125 GO:0003713|GO:0060261
Trre7g05584 180 Gene3D Transcriptional Coactivator Pc4; Chain A 104 180 IPR009044 GO:0003677|GO:0006355
Trre7g05584 180 PIRSF RNA_polymII_KELP 1 180 IPR017415 -
Trre7g05584 180 Coils Coil 56 97 - -
Trre7g05584 180 SUPERFAMILY ssDNA-binding transcriptional regulator domain 113 175 IPR009044 GO:0003677|GO:0006355
Trre7g05584 180 MobiDBLite consensus disorder prediction 64 101 - -
Trre7g05584 180 Pfam Transcriptional Coactivator p15 (PC4) 114 164 IPR003173 GO:0003677|GO:0006355
Trre7g05584 180 FunFam RNA polymerase II transcriptional coactivator KELP 105 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05584 Trre-Chr7 61391614 61393901 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Trre7g05584 DEK_C 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05584 K25815 - gmx:100499671 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05584 7 61391614 61393901 Trre7g05584 7 61391614 61393901 ECH