Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05583 ATGGAAGATACTGAAACAAAAGCAAGAATCGAAGAAACAGTTCTTAAGATCCTCCACGAATCAAACATGGATGAGGTAACTGAATCAAAGATCCGAAAACAAGCCTCCACCGAATTGGACCTAAACCTAAACCAGCCTCCATTCAAAGCTTTGGTGAAACAAATCATCGAAGATTTTCTTGTGGAGAAGCAGCAACAACAACAAAAGGAAGAAGAAGAAAAGCAGCGAGAGAAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGAAAAGCAAGAGGTTAAACAAAAAGGTGTTTCCAGCAAAAGCAATGTCTACGTCGATTCTGGCGATCTCGTCATTTGTGAGCTTACGAAAAAGAGAAAGGTGACCATTCAGGATTTCAAAGGGAGAAGGTATGTCTCCATTCGCGAGTTTTACACCAAGGATGGCAAGGAACTTCCTTCTAATAAAGGAATAAGTTTGTCTGGGGAGCAGTGGGAAGTCCTTAAGAATTGTGTGCCTGCCATAGAAGAAGCGATCGAGAAAATGGAGTCGCGATTTGAAATCACTATGAATCATGTTCTTTTAACTGTACTGCAACTGGCTAGAGTATAG 594 0.4057 MEDTETKARIEETVLKILHESNMDEVTESKIRKQASTELDLNLNQPPFKALVKQIIEDFLVEKQQQQQKEEEEKQREKEEEEEVEEEEEKQEVKQKGVSSKSNVYVDSGDLVICELTKKRKVTIQDFKGRRYVSIREFYTKDGKELPSNKGISLSGEQWEVLKNCVPAIEEAIEKMESRFEITMNHVLLTVLQLARV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05583 197 SUPERFAMILY DEK C-terminal domain 4 57 - -
Trre7g05583 197 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Trre7g05583 197 FunFam RNA polymerase II transcriptional coactivator KELP 105 177 - -
Trre7g05583 197 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 178 IPR045125 GO:0003713|GO:0060261
Trre7g05583 197 Pfam Transcriptional Coactivator p15 (PC4) 114 164 IPR003173 GO:0003677|GO:0006355
Trre7g05583 197 Gene3D Transcriptional Coactivator Pc4; Chain A 104 181 IPR009044 GO:0003677|GO:0006355
Trre7g05583 197 Coils Coil 56 97 - -
Trre7g05583 197 Pfam DEK C terminal domain 5 60 IPR014876 -
Trre7g05583 197 PIRSF RNA_polymII_KELP 1 180 IPR017415 -
Trre7g05583 197 MobiDBLite consensus disorder prediction 64 99 - -
Trre7g05583 197 SUPERFAMILY ssDNA-binding transcriptional regulator domain 113 175 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05583 Trre-Chr7 61391614 61394108 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Trre7g05583 DEK_C 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05583 K25815 - gmx:100499671 179.104