Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05559 ATGGCTACTCATCTACCATCTTTAACTTCCTTATTCATCTTCTTCATCTTAATATTAACAACAAAAAGCCAAAAATTCACATGTAAAACAACATCATGCGAAACCTTTGGACTTCCAATTCAGTTCCCATTTTCATTAAACCAGTCAAACCAAACAAATCTTTGTACTTACCCAGGTTTCGAACTCACATGTAGCAACACCACAACCACCTTCTTCAGCGAACCTTTACTCACTCTCTCAAATTCCGAACAATTTGTTGTAAAACGAATCTCTTTAAAAGACCGAACAATTTGGGTCAACGATCCTAAGTGTCTTCCAAAACATTTCATGTTTGATCATCATGATAATAACTTCATGTTAAACCTTAAAGATTCACCGTTTCGGTTAGGGGATTATTATACTTTTGTTAATTTTTCATTCCTAGTTGTCCTTCAAATTCAACTGTTTTATCTATGGTACCACCTATAA 468 0.3419 MATHLPSLTSLFIFFILILTTKSQKFTCKTTSCETFGLPIQFPFSLNQSNQTNLCTYPGFELTCSNTTTTFFSEPLLTLSNSEQFVVKRISLKDRTIWVNDPKCLPKHFMFDHHDNNFMLNLKDSPFRLGDYYTFVNFSFLVVLQIQLFYLWYHL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05559 155 Pfam Wall-associated receptor kinase galacturonan-binding 28 101 IPR025287 GO:0030247
Trre7g05559 155 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 139 IPR046948 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05559 11 118 C3H Transcription Factor Family AT2G25410 34.545 8.53e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05559 - - mtr:25502189 196.823