Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05510 ATGGAACAGAAAAGCTTTTTGATATCAGCGCTTAGTGTTGGGGTTGGAGTTGGAGTTGGAATTGGATTAGCTTCTGGACAAACTGTTTCTAAATGGGGAGGAGGAGGATCTACTTATTCTTCTTCATCTTCATATTCTTTTATTACTGCTGATCAAATTCACCATGAAATGCTCCGTTTAATTGTTGATGGCAGAGATAGCAATGTTACTTTCGACAAATTCCCTTATTACCTAAGTGAGCAAACACGGGTTTTGTTGACAAGTGCTGCTTATGTTCATTTAAAGCATGCTGAAGTTTCTAAATATACGCGTAATCTTGCTCCTGCTAGCAGAACTATTCTTCTATCAGGGCCTGCTGAACTCTACCAACAAGTGCTTGCCAAGGCTTTAGCTCATTACTTTGAGGCCAAGTTACTTCTCTTGGATTTAACCGACTTTTCATTGAAGGTTCAAAGTAAATATTGTTCCGGCAACAAAGAATATTCTTTCAAAAGATCCACTTCAGAGTCAACTTTGGAGAAGCTATCTGATCTATTTGGGTCATTTTCAATCTTTCAACAAAGAGAGGAACCTAAAGTTGCAGGAAAATTGCACAGGCAAAGCAGTGGAATGGACCTACAATCAATGGGTAATGAAACATCTTGTAATCCCCCAAAGCTCCGTAGAAACGCTTCTTCTTCTTCAAATATCAGTGGCCTTACTTCGCAAAGCAATCCTACAAATTCAGCTCCTTTGAAGCGCACAGCCAGCTGGTCTTTTGATGAAAAACTACTTATACAGTCTCTTTACAAGGTTCTATTGTCTGTGTCTAAAACCTATCCCATTGTGCTATATCTGAGGGATGTTGATAGGTTATTATCTAGATCACAGAAGATATATAACATGTTCCAAAACATGTTGAAGAAACTCTCTGGACCAATTCTGATTCTTGGTTCGCGAGTTCTAGATTCTAGTAATGAATTTGAAGAGCCGGATGAGAAACTTACTTTGCTCTTCCCGTACGATATAGAAATCAGACCTCCAGATGATGAATCACATCTTGTCAGCTGGAAATCTCAATTGGAAGAGGATATGAAGATGATACAAGTTCAGGATAACAAGAATCATATCACGGAAGTGCTTGCAGCCAATGATCTCGATTGCGATGACTTGGATTCCATCTGTGTGGAAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCAATCTCTCATCATTTGATGAAAAACAAAGACCTTGAATATAGAAATGGAAAGCTAATTATTTCTTGCAATAGTTTGTCGCATGCACTGGGTATATTCCGAAAGGGGAAATTCAGTGGAAGTGATACATCAAAATTGGAAGATCAAGCTCCAAAATCTGAGATTCCAAGTGTGGTAGAAACTGTTGCTAAACCAGCAGCGAAGGCTGAAAGTGCTGCTGCTCCAGAAAAAAAGGCTGAAGCAGAAATATCAACTTCAGCGGCAAAGACAGGTGTTGAAAAATCAGTTCCACCATCTAAAGCTCCTGAAGTTTCTCCTGATAACGAATTTGAGAAACGAATAAGGCCTGAAGTTATACCAGCAAAAGAGATTGATGTCACATTCGCTGATATTGGTGCCTTAGAAGAAACAAAAGAATCCCTTCAAGAACTAGTAATGCTTCCTCTCCGAAGGCCAGACCTTTTCACCGGAGGACTTCTAAAGCCATGCAGAGGAATATTGCTATTTGGTCCTCCTGGAACTGGAAAGACAATGCTAGCAAAGGCCATTGCAAAAGAAGCTGGAGCAAGTTTCATTAATGTGTCTATGTCTACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGTGCTTTATTCACACTTGCAGCCAAAGTCTCTCCTACTATTATATTTGTCGATGAGGTTGATAGCATGCTTGGGCAACGAACAAGAGTTGGGGAGCATGAAGCCATGCGGAAAATAAAGAATGAATTTATGTCTCATTGGGATGGGCTCACAACAAAACAAGGAGAGCGTATCCTTGTTCTTGCAGCAACCAATAGGCCATTTGACCTTGATGAAGCTATTATAAGGCGATTCGAAAGGAGAATTATGGTAGGACTACCATCTGTTGAGAACAGGGAAAAGATTTTAAGGACACTTTTGGGAAAAGAAAAGGTGGACAAGGAAATTGATTTTAAGGAACTAGCCACCATGACAGAAGGATATACTGGAAGTGATCTAAAGAACTTTTGCACAACTGCTGCTTATCGACCTGTTAGAGAATTGATTCAGCAAGAGAGATTAAAGGATCTGGATAAGAAACAGAAAGCTACAAAGGAACAAAGCAAAAATACCGAAGAAGAACCGAAAGAGGAAGTTCAACAAGAAAGAGTTATTACCTTGAGGCCATTGAATATGCAGGATTTCAAAGAGGCCAAGAAACAAGTTGCTGCAAGCTTTTCTGCTGAGGGTGCTGGAATGGGTGAGTTGACTCAGTGGAATGAGTTGTATGGAGAAGGTGGTTCTAGGAAGCAAAAGCAGTTGTCATATTTCCTGTGA 2544 0.3986 MEQKSFLISALSVGVGVGVGIGLASGQTVSKWGGGGSTYSSSSSYSFITADQIHHEMLRLIVDGRDSNVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKVQSKYCSGNKEYSFKRSTSESTLEKLSDLFGSFSIFQQREEPKVAGKLHRQSSGMDLQSMGNETSCNPPKLRRNASSSSNISGLTSQSNPTNSAPLKRTASWSFDEKLLIQSLYKVLLSVSKTYPIVLYLRDVDRLLSRSQKIYNMFQNMLKKLSGPILILGSRVLDSSNEFEEPDEKLTLLFPYDIEIRPPDDESHLVSWKSQLEEDMKMIQVQDNKNHITEVLAANDLDCDDLDSICVEDTMVLSNYIEEIIVSAISHHLMKNKDLEYRNGKLIISCNSLSHALGIFRKGKFSGSDTSKLEDQAPKSEIPSVVETVAKPAAKAESAAAPEKKAEAEISTSAAKTGVEKSVPPSKAPEVSPDNEFEKRIRPEVIPAKEIDVTFADIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLTTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLGKEKVDKEIDFKELATMTEGYTGSDLKNFCTTAAYRPVRELIQQERLKDLDKKQKATKEQSKNTEEEPKEEVQQERVITLRPLNMQDFKEAKKQVAASFSAEGAGMGELTQWNELYGEGGSRKQKQLSYFL 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05510 847 Gene3D - 530 818 IPR027417 -
Trre7g05510 847 MobiDBLite consensus disorder prediction 474 514 - -
Trre7g05510 847 SMART AAA_5 567 704 IPR003593 GO:0016887
Trre7g05510 847 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 53 846 - -
Trre7g05510 847 Pfam ATPase family associated with various cellular activities (AAA) 571 701 IPR003959 GO:0005524|GO:0016887
Trre7g05510 847 ProSitePatterns AAA-protein family signature. 674 693 IPR003960 GO:0005524|GO:0016887
Trre7g05510 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 530 815 IPR027417 -
Trre7g05510 847 Pfam AAA+ lid domain 725 767 IPR041569 -
Trre7g05510 847 MobiDBLite consensus disorder prediction 201 245 - -
Trre7g05510 847 Coils Coil 763 783 - -
Trre7g05510 847 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 530 705 - -
Trre7g05510 847 MobiDBLite consensus disorder prediction 196 245 - -
Trre7g05510 847 MobiDBLite consensus disorder prediction 765 792 - -
Trre7g05510 847 Gene3D - 703 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05510 Trre-Chr7 60838340 60844951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05510 518 763 Calmodulin-binding Proteins AT3G56690 37.795 3.48e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05510 - - gmx:100807464 1325.84