Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05496 ATGGATGAGCTTGCTTTCTTAATGGATTGGGATTTGGATGCTATCAATGAATTAGCTCCAACAACAAACAATCCTTATTTTTCTCATTTATTTTCTGAACAAGATGATGAGTTATTATTTGGAAGTTTTCCAGAATTCTCAAAAACCAAAAATGCCCTTATTGATGAATTTGAAGAGCTTTGCAAACCTTGCTACCCTCTTTCATCTCAAACCATCGTTACAACAAGTTCTCTTACTACTATTGTCCCTAAAGAGCCTCATCATGAAGTCAAAGAAATTAAAGCATCAAAGAAAGTAGCTTCTCAAGATTTGTATGTTCCTGCAGTACCTAAATGTAAAAAAAGCAAGAAAAAGAACAAGAATATTGTGAAGAAAGTAACAGCAGTGGATGGTACTCTTTGTGATGCATGGGCATGGCGAAAATATGGACAAAAACCAATAAAGGGTTCACCTTATCCACGAAGTTATTATAGATGTAGCAGTTCCAAAGGATGTTTGGCAAGAAAACAAGTTGAAAAGAATCATTTGGATCCAAAAGTTTATTTAGTTACATACACGGCAGAACATAATCATCCTCAACCAACTCGAAGAAACTCGTTAGCCGGAAGCACTAGGAAGAACAATAATCTCTTGGTTGAACATTCTTCTAGCACATTAACTCGTGCCCAAAAAACTTGTTCTATCAATTCCTTAGTAGTAACTCACTCTCCAAATACAACTTTGGTGAAAATTGAAGATGAGGTAAGTATGCAAGAACAAAGTAATGGAATATTGGAGGATATGGAAGATCATCATCTTCTTGAATGGTTGGATGGTTCTCAATTATGTGATGATGGTTGGATTCCAAGTAAAGAGCTAGAGGAATTTATTGGACTAGATAATAAGTACCAATAA 894 0.3512 MDELAFLMDWDLDAINELAPTTNNPYFSHLFSEQDDELLFGSFPEFSKTKNALIDEFEELCKPCYPLSSQTIVTTSSLTTIVPKEPHHEVKEIKASKKVASQDLYVPAVPKCKKSKKKNKNIVKKVTAVDGTLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVEKNHLDPKVYLVTYTAEHNHPQPTRRNSLAGSTRKNNNLLVEHSSSTLTRAQKTCSINSLVVTHSPNTTLVKIEDEVSMQEQSNGILEDMEDHHLLEWLDGSQLCDDGWIPSKELEEFIGLDNKYQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05496 297 SUPERFAMILY WRKY DNA-binding domain 132 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g05496 297 Gene3D WRKY domain 117 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g05496 297 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 91 223 IPR044810 GO:0003700
Trre7g05496 297 ProSiteProfiles WRKY domain profile. 128 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05496 297 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05496 297 SMART WRKY_cls 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05496 Trre-Chr7 60713282 60714802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05496 1 277 WRKY Transcription Factor Family AT4G23550 37.201 6.00e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g05496 WRKY 2.2e-24 CL0274