Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05456 ATGGATACATCAACTGCTTTAATGATCTTATCAGCCATAGCAGCTTACTTAATATGGTTCTCATTCATCACACGATCACTAAAGGGTCCACGTGTCTGGCCAATATTGGGTAGTTTACCTGGTCTCATCCAACATGCCAACCGCATGCACGACTGGATCGCTGAAAATCTACGCGCGTGTGGTGGCACGTACCAAACCTGCATCTGCGCCGTTCCTTTCCTAGCTAAAAAACAGTGTCTCGTGACTGTCACGTGCGACCCAAAAAACCTTGAACACATCTTAAAACTCCGTTTCGATAATTACCCGAAAGGTCCAGCGTGGCAGTCAGCGTTTCATGACTTACTCGGAGAAGGTATATTCAACTCAGATGGTGACACGTGGAAGTTCCAGCGTAAAACCGCCGCACTTGAATTCACCACTCGTACACTACGACAAGCCATGTCTCGTTGGGTTAGCCGAGCCATAAAATTTAGATTCTGTCCTATTTTAGCTACGGCTCAGGAAGAAAAAAGCTCCGTCGATCTTCAAGATCTTCTCCTTCGACTCACTTTTGATAACATATGTGGTTTGGCTTTCGGTAAAGACCCTCAAACACTAGCTGTAGGACTTCCAGAAAACGGCTTCGCTCTTTCTTTCGATCGAGCCACGGAAGCCACACTGCAACGATTCATTTTACCTGATTTTGTTTGGAAGCTGAAGAGATGGCTTCGTTTAGGAATGGAAGGGAGCTTAAGCCGAAGCCTGAAACTCATAGATCAATATCTCTCCAACATCATTCAAAATCGTAAGATGGAGCTGAAGAATGGAAGTGAGGCGTTAAACGACGATTTACTTTCGCGTTTCATGAAGAAAAAAGAGTCTTATTCTGAAGAGTTTCTTCAACATGTGGCTCTTAATTTCATCCTAGCTGGACGTGACACGTCATCGGTTGCCTTAAGTTGGTTTTTCTGGCTTTGTATGAAAAATCCAGAAGTGGAGGAAAAAATACTGATTGAGATCTGCACCGTTCTGATGGAGACACGTGGTGCTGATGTGTTAAAATGGACGGATGAGCCTCTTGCTTTTGACGAAGTTGATCGTTTGGTTTATCTGAAAGCTGCTTTATCTGAGAGTTTACGACTTTACCCTTCAGTTCCAGAAGATTCAAAGCATGTGGTGAACGACGACGTTTTGCCAAACGGAACATTCGTTCCGGCGGGTTCGACGGTGACGTATTCGATTTACTCCGTTGGGAGGATGAAGTTTGTTTGGGGAGAAGATTGTCTTGAATTTAAACCTGAACGGTGGCTTTATAGCGACGGTGAGAAGTTGCAGGGATCTTACAAATTTGTTTCGTTCAATGCGGGGCCTAGGATTTGTTTGGGTAAGGATTTGGCTTATTTGCAAATGAAGTCTATTGCTGCCGCGGTGCTGCTGCGCCACCGTCTAACGGTGGTGCCTGGACACCGCGTGGAGCAAAAGATGTCGTTGACGCTGTTCATGAAGTATGGACTTAAGGTGAATCTGCATCCGAGGGATCTTGCACCAGTGCTGGAAAAGATAAGCAACAGAGGTGTAGGGGTTGAAACTTGA 1572 0.4529 MDTSTALMILSAIAAYLIWFSFITRSLKGPRVWPILGSLPGLIQHANRMHDWIAENLRACGGTYQTCICAVPFLAKKQCLVTVTCDPKNLEHILKLRFDNYPKGPAWQSAFHDLLGEGIFNSDGDTWKFQRKTAALEFTTRTLRQAMSRWVSRAIKFRFCPILATAQEEKSSVDLQDLLLRLTFDNICGLAFGKDPQTLAVGLPENGFALSFDRATEATLQRFILPDFVWKLKRWLRLGMEGSLSRSLKLIDQYLSNIIQNRKMELKNGSEALNDDLLSRFMKKKESYSEEFLQHVALNFILAGRDTSSVALSWFFWLCMKNPEVEEKILIEICTVLMETRGADVLKWTDEPLAFDEVDRLVYLKAALSESLRLYPSVPEDSKHVVNDDVLPNGTFVPAGSTVTYSIYSVGRMKFVWGEDCLEFKPERWLYSDGEKLQGSYKFVSFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVVPGHRVEQKMSLTLFMKYGLKVNLHPRDLAPVLEKISNRGVGVET 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05456 523 Pfam Cytochrome P450 28 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Trre7g05456 523 PANTHER CYTOCHROME P450 20 500 - -
Trre7g05456 523 CDD CYP86A 67 498 - -
Trre7g05456 523 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 SUPERFAMILY Cytochrome P450 21 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05456 523 FunFam Cytochrome P450 21 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05456 Trre-Chr7 60391933 60393504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05456 1 514 Cytochrome P450 AT4G00360 75.000 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05456 K15398 - gmx:121174913 916.761