Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05449 ATGGAGAAAAGATCTCCTCCACTTGTGAACCAAAAATGCACATCGCGGATGTTTGGAATCTTCAATTTTCGTGAAGCTCATTCTGATGAAACATTGGCTTCCGATAGGCGGCATTTGAATAAACACGCCGGTGGTTTTAGGGACAATTACCATAATCTTTGTAGCAGCGAAATGGAAGGTGTGTCGGTGTCGGACACTGACACTAGAAATGGAAAATCCAGAATTAGTTCAGATGTGCTTAGCACAGTTGATGAGAAGTACCCTCATGCCGATGTAAGTTCAAGAAGAAGAAGAGGTTATAGTTGTAAGAGTATTTGTGTGGAGAATGATCAGATAGCAAATTTGGAAAATGAAGCAACAAAAATGATAGTTAACCAGAGATTTTTCAACAAAAACTCTCAAGGCAAAGATGGTGGTGCAGACTCTCGGCCTAATCAATTTTTGGATGCTGTACAGATTTTATATTCGAACAAGGAACTTTTCACAAAACTTCTGCAAGATCCAAACTCACTATTGGTAAAACAGATTCATGGCTTACAGAAAAATCAAGTAAAAGCAGAACAAAATGGAATGAACAGGTTGAATAAAGATCAAAACTGTAGTAATTTTGATCGGTGCAATTTGAGTAAAAATTGCAAGTCACGGTCCTCTAAAAGAATAGTAGTTTTGAAGCCTGGCACAAATAATGTGAAAAAATTTGCTGACAATAGAGATGCTCATAATATGAAGCCTTCACATTTTGCATTTGGTGGTATAAAGAGAAAGTTGAGATATGTCATGAGAGTAAGGAAAAAAGAGCAGCAGTGGATGGCAACTGATTCGGCGCCAAGTAAATTTCGCTGCTGTTCGCAGAACATGGAAGATGGTAAAAATGTAGAAAAATTGGACATTGCCATAAGAAATTCGCTAAATAATGCCCATGTTAGTACTGGAAAAAATTTGAAGGATTCCAAGTTTAAGGATCCCGAGTTAAGTGTGAGACAGGAAGTTGCTTCTAAGCAAAATAAATTGACCATGAAGGACCAAGATGCAAAAGTTACATCTCACAACAAACACCAAATGGTTCTCAAAACATTTCATAGAGATGGCGAAAGTTGTTCTTATACAAGTTCTTCTTCTCATGAAATCAAGGATCCTCCAGTAGCCACTTTTAGCGATGAGTTGCAGGTTTTTGATGCGGCAGATATTAGTGTCAATACGAATCTTCCTGGCGACAATTTACATGCACATTATGATATTCCAAGAGATGGAGTACTAGTACAAGAAGTTACACATGATAAATTTAAAGAGAACAACCTTGTAACATCCTCTTTGGGTCCAAGGAACAGCTCAAAGGACATCATAAGGGAAGTTCTGCAGGATTTCAGCTTGAAATGTGATGAACCTGTGAAGAGTCATTTATCAAACCTATTGAATGATTCATCCACTTTTGATGAACTGAAGGGATTAACTGACCATCTTTCTGGCAGTAAAATCCTGCATGACTGTATCATCGAATGTTTCATGGAGTTATACCAAATCTGTGGTTTCCAACCTCATTTTTCATCAAGAAATCCTAACTTTCAATCATGCGTTGTGAGGAAAATTTTTGTTAGAGAGATTAATGAACTTGTTAACCTGCACTTTTTCCCTCATCCATCACCAATAAAGTTACAAGAACTTGTTGAAAAGGACTTAGCAAGACGTGGATCATGGTTGAATGATATCCAAGTTGATATAGAAGACATTGCAATTGAGGTGGAGAAAGATGTTTTGGAAAAACTGGTGTTAGAAATAGTTTCTGAGATGGATATCAGAGACTTGATACAATGCAATGAACATATGTCTAAATCATAA 1836 0.3709 MEKRSPPLVNQKCTSRMFGIFNFREAHSDETLASDRRHLNKHAGGFRDNYHNLCSSEMEGVSVSDTDTRNGKSRISSDVLSTVDEKYPHADVSSRRRRGYSCKSICVENDQIANLENEATKMIVNQRFFNKNSQGKDGGADSRPNQFLDAVQILYSNKELFTKLLQDPNSLLVKQIHGLQKNQVKAEQNGMNRLNKDQNCSNFDRCNLSKNCKSRSSKRIVVLKPGTNNVKKFADNRDAHNMKPSHFAFGGIKRKLRYVMRVRKKEQQWMATDSAPSKFRCCSQNMEDGKNVEKLDIAIRNSLNNAHVSTGKNLKDSKFKDPELSVRQEVASKQNKLTMKDQDAKVTSHNKHQMVLKTFHRDGESCSYTSSSSHEIKDPPVATFSDELQVFDAADISVNTNLPGDNLHAHYDIPRDGVLVQEVTHDKFKENNLVTSSLGPRNSSKDIIREVLQDFSLKCDEPVKSHLSNLLNDSSTFDELKGLTDHLSGSKILHDCIIECFMELYQICGFQPHFSSRNPNFQSCVVRKIFVREINELVNLHFFPHPSPIKLQELVEKDLARRGSWLNDIQVDIEDIAIEVEKDVLEKLVLEIVSEMDIRDLIQCNEHMSKS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05449 611 Pfam Domain of unknown function (DUF4378) 452 591 IPR025486 -
Trre7g05449 611 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 349 - -
Trre7g05449 611 Pfam Protein of unknown function (DUF3741) 143 170 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05449 Trre-Chr7 60351642 60354042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05449 429 603 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 31.073 2.80e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05449 - - tpra:123915942 1013.06