Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05438 ATGTCTGGATGCAATAAATCACCTAAAAATGATCAACATTCGATTAAATATCCGTGGATTCAACACGGAGGGGAATCGTCTAAGGATGATATTTCTTGTGTAGATTGTTCGCCTCCTCAACTGAATCCTCCTGAGATACTGACCACGCCGCAGCTCATCTCTGCAATAGGCCAGTTATGGGTTTCTGCTAGTCGTCCACTTTCATTTTTACTTCCGAAGGAAAATATGGATAAAGATAATAAAGGATTCTCAAAAGAGAAAATTCTGGGTAACATTCATGAGAATAAAAATGGTGTCGTTACTTCAAATAACACTAATTACTATTCTGTTAATCCGGGTGCTACTTGCTTCGGTTCACAAATTGTGCAGGAAAAGTTGGATTTCCCTAAGGCAAGCGATCAAAATTCAAATGAATATTGTGATAAACTGGAACTTGGGAGTGAAGAAATTTCGTTTAGATCAGGAAATGTTCCTAGTGAGCTAAACTGTCATGCAAAGGTTACTGAGCCTGAGAACCTGAAAACTAATTCTTTGGTTGCCAGGGACTGCATTTCAATAGACGCAATCCCCACTTCATTGGCTAATGAAAGAGATGTATGCAATCCTGATGTACTCATACGTGAAGCTCCAGCATTATCTAATGATGCAGTTTTGAACACAAAAGAAGTTAACCCTCTGTGTTCGGACTATTTTCTTCAAGTTGTGCCTGATAATCAGATGGATGTTGATGCTTGTCAGACCCTTTCTTCTAGTATCTATGCAGACTATCATATTATCAACTCTTTAGCTACCTGTAACACTGCTAACACTGCTTCTGTGCAGTGCCAATGTAAGATTGATGATAATGAAAGTGAATTAATGGAAATTCAAAGAAGCCATTTATCCGATATAACCGATGATGAACCTAAGCTTCAGATATTCTCTGCAACTAATCGGAAGCCTTACCATTCCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCATTGGCTGGAATATGTGTCAGCTGTTGTCTGCATCCTGTTGACACAATCAAGACAGTCGTTCAATCATGTCGTGCAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTTCCTGGACTATATCGTGGAATCACTACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCACGTATGAATCGGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGAATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACGTCTTTCATCTTCACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGATCTCATTATCGCAACTGCTGGGATGTATTGATCGGAATTATCAGAAATGGTGGTCTTTCCTCGCTATATGCAGGTTGGAGAGCTGTACTATGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTTCTAGTATTCAATCCCACACATTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCGACTGCTGCTTTATTCACGACTCCGTTTGATGTGATCAAGACAAGATTACAGACACAGATTCCTGGATCAAGAAATCAATATGATAGTGTGTTCCATGCCCTTTACAAAATTAGCAAGACCGAAGGTTTGAAGGGCTTATGCAGGGGGTTGACTCCAAGGTTGATTATGTACATGTCTCAAGGATCATTGTTCTTTGCTTCATACGAATTTTTCAAGAGTGTATTTTCTCTGGAAGCATCCCTTCCCACTGGTTTATAA 1806 0.3992 MSGCNKSPKNDQHSIKYPWIQHGGESSKDDISCVDCSPPQLNPPEILTTPQLISAIGQLWVSASRPLSFLLPKENMDKDNKGFSKEKILGNIHENKNGVVTSNNTNYYSVNPGATCFGSQIVQEKLDFPKASDQNSNEYCDKLELGSEEISFRSGNVPSELNCHAKVTEPENLKTNSLVARDCISIDAIPTSLANERDVCNPDVLIREAPALSNDAVLNTKEVNPLCSDYFLQVVPDNQMDVDACQTLSSSIYADYHIINSLATCNTANTASVQCQCKIDDNESELMEIQRSHLSDITDDEPKLQIFSATNRKPYHSLAKQEHAFSGALAGICVSCCLHPVDTIKTVVQSCRAEQRSIFYIGKSIVSDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAALLPYLPKENYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLIGIIRNGGLSSLYAGWRAVLCRNIPHSMIKFYTYESLKQVMPSSSIQSHTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSRNQYDSVFHALYKISKTEGLKGLCRGLTPRLIMYMSQGSLFFASYEFFKSVFSLEASLPTGL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05438 601 FunFam Mitochondrial substrate carrier protein-like 297 444 - -
Trre7g05438 601 ProSiteProfiles Solute carrier (Solcar) repeat profile. 502 590 IPR018108 -
Trre7g05438 601 Pfam Mitochondrial carrier protein 322 403 IPR018108 -
Trre7g05438 601 Pfam Mitochondrial carrier protein 503 592 IPR018108 -
Trre7g05438 601 Pfam Mitochondrial carrier protein 413 496 IPR018108 -
Trre7g05438 601 FunFam Mitochondrial substrate carrier protein-like 445 601 - -
Trre7g05438 601 ProSiteProfiles Solute carrier (Solcar) repeat profile. 318 402 IPR018108 -
Trre7g05438 601 Gene3D Mitochondrial carrier domain 412 600 IPR023395 -
Trre7g05438 601 Gene3D Mitochondrial carrier domain 300 411 IPR023395 -
Trre7g05438 601 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 299 594 - -
Trre7g05438 601 ProSiteProfiles Solute carrier (Solcar) repeat profile. 411 494 IPR018108 -
Trre7g05438 601 SUPERFAMILY Mitochondrial carrier 322 587 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05438 Trre-Chr7 60309844 60313167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05438 301 591 Chloroplast and Mitochondria Gene Families AT1G07030 33.660 1.30e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05438 - - gmx:100812271 805.823