Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05423 ATGACGGGGAAGCTGAAGGTGTATGCAGATCGTATGTCCCAACCATCTAGAGCAGTTCTTATATTCTGCAGGTTGAACGGAATTGATTTTGAGGAGATTAAAGTTGACATTTCCAAACGTCACCATCTATCTCCTGAATTCACAGAAGTAAACCCTCTGCAGAAAGTTCCAGCTATTCTTCATGGAAACCTCAATCTCTTCGAGAGCCATGCAATCCTTGTCTATCTTTCTTCTACTTTTCCTGGAATTGCTGACCATTGGTATCCAACTGATGTTTTCAGGAGAGCAAAAGTCAATTCTGTATTGGATTGGCATCACTCTAATTTACGATATGGAGCAGTGAATTATGTAACAAATACTGTATTAGGACCCGCACTTGGCCGTCCGCTGAATCTAAAAGCAGCTGCTGAAGCAGAATTTTTTTTATCTTCTTCGTTATCAAAACTAGAGAATATTTGGCTCAACGGAGATGGACGATTCCTTCTCGGTAGCTTTCAACCGTCTATAGCAGATCTCAGCCTGGTTTGTGAACTCACACAACTTGAGGTTTTGGACGAGAAGGACCGCAACCGAATAATATCCCCATACAAGAAAGTTGTTGGGTGGATTGAGGATACAAGAACTGCAACAACTCCCCACTTTGAAGAAGTGCATAATATCCTTTATAGAGCTAAAAAGAAATTCCAACAGCAACGTTCAAGGATAGCTGAATCTGGAACTGAGGGTAACAACAACATGGGGAGAAATTCGAAGATGTGA 759 0.4137 MTGKLKVYADRMSQPSRAVLIFCRLNGIDFEEIKVDISKRHHLSPEFTEVNPLQKVPAILHGNLNLFESHAILVYLSSTFPGIADHWYPTDVFRRAKVNSVLDWHHSNLRYGAVNYVTNTVLGPALGRPLNLKAAAEAEFFLSSSLSKLENIWLNGDGRFLLGSFQPSIADLSLVCELTQLEVLDEKDRNRIISPYKKVVGWIEDTRTATTPHFEEVHNILYRAKKKFQQQRSRIAESGTEGNNNMGRNSKM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05423 252 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 4 237 IPR043377 -
Trre7g05423 252 FunFam Glutathione S-transferase theta-1 85 233 - -
Trre7g05423 252 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Trre7g05423 252 CDD GST_N_Theta 5 80 IPR040075 -
Trre7g05423 252 MobiDBLite consensus disorder prediction 232 252 - -
Trre7g05423 252 MobiDBLite consensus disorder prediction 233 252 - -
Trre7g05423 252 SFLD Main.4: Theta-like 4 232 - -
Trre7g05423 252 Gene3D Glutaredoxin 4 83 - -
Trre7g05423 252 Gene3D - 84 241 - -
Trre7g05423 252 SUPERFAMILY GST C-terminal domain-like 85 218 IPR036282 -
Trre7g05423 252 SFLD Glutathione Transferase (cytosolic) 4 232 IPR040079 -
Trre7g05423 252 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
Trre7g05423 252 SUPERFAMILY Thioredoxin-like 4 89 IPR036249 -
Trre7g05423 252 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 228 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05423 Trre-Chr7 60191329 60193644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05423 4 240 Glutathione S-transferase Gene Family AT5G41210 66.245 7.96e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05423 K00799 - gmx:100799229 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05423 7 60191329 60193644 Trre7g05423 7 60191329 60193644 ECH