Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05383 ATGGAGAGACATGAAGTGATGTTCCCTATATCATCTTCAAAAGATGCTTCTCATATTGATGTTAAACCCGGTAATGCCTCTAATATTCATGTTAAAAAGGCAGAGTTATTTCTAAAAACTATAAGGAAGGATACATCAAAGCAGAAAGGTAGCAAAGAAATCATGAAGCACAAATATGTATTTCAAACAAGGAGTCAGATCGATAGACTAGACGATGGGTTCCGATGGAGAAAGTACGGGGAAAAGTTGGTGAAAAACAACAAATATCCTAGAAGTTATTACAAATGCACTTATCGAGGCTGCAATGTAAAGAAACAAATCCAAAGGAATTCCAAAGAGGAGCAGATTGTAGAAACAACTTACGAGGGAATGCATATTCACCCTGTCGAGAAGTCAACTGAAAGCTTCGACCAGATCTTGAAAAATTTTATCACAAGCAATCAACTATATAATGTAAATTGCCATTGA 468 0.359 MERHEVMFPISSSKDASHIDVKPGNASNIHVKKAELFLKTIRKDTSKQKGSKEIMKHKYVFQTRSQIDRLDDGFRWRKYGEKLVKNNKYPRSYYKCTYRGCNVKKQIQRNSKEEQIVETTYEGMHIHPVEKSTESFDQILKNFITSNQLYNVNCH 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05383 155 FunFam WRKY transcription factor 57 56 130 - -
Trre7g05383 155 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 134 IPR044810 GO:0003700
Trre7g05383 155 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05383 155 Gene3D WRKY domain 53 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g05383 155 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05383 155 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05383 155 SUPERFAMILY WRKY DNA-binding domain 62 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05383 Trre-Chr7 59911778 59912693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05383 58 151 WRKY Transcription Factor Family AT5G13080 64.894 7.98e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g05383 WRKY 5.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05383 - - mtr:25502011 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05383 7 59911778 59912693 Trre7g05383 7 59911778 59912693 ECH