Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05356 ATGGCAAATAAAATGAATATAAAGTTAGGAGAACCAACTCTTGTTCTTCCTGCAGAACCAACAAAGAAAGGACTATACTATCTTTCAAACCTTGATCAAAACATAGCATATCCAGTTCGTACAATTTACTGTTACAAGTCATGTTCTAAAGGGAATGAGGATGTTACAAAAGTGATTAAGGATTCCTTGTCAAAGATTCTTGTTCAATACTATCCTATGGCTGGAAGGTTAACAATAAGCTCAGAAGGAAAATTGATAATAGATTGTACTGAAGAAGGTGTTGTGTTTGTTGAAGCTGAAGCAAATTGTATGATGGAGGATTTGGGTGATATGACAAAGCCTAACAATATTGAAATTCTTAGAAAACTTGTTTATGATATCCCTAATGCAAAGAACTTACTTGAGATACCTCCTCTGCTTATTCAGGTGACAAAGTTCAAATGTGGAGGATTTGTTTTGGGAGTAAATGTGAATCATTGTATGAATGATGGTATAAGTGCTATGCAATTTGTTAACTCTTGGAGTGACATAGCAAGAGGACTAGACTTAAAAATTCCACCATTTCTAGACAGAACAATACTCAAACCACGTAATCCTCCACAAATAGATTTCTCACACCATGAATTTGCTGAAATTGAAGATTTATCAAACACAAACAAATTAATCCATGAGGAAGAAGAAATGGTCTACAAATCCTTCTATTTTAACCAAAACAAACTTGAACTTCTCAAGAAAAAAGCCACAGAAAATGGTATTGTGAATAAGTGCTCAACTTTTGAAGCACTTTCAGCTTTTGTTTGGAGAGCTAGAACTAAAACATTAAATGTGCATCCAAATCAAGAAATGAAGTTACTTTTTGCTGTTGATGGAAGATCAAAATTTGTTCCACAAATACCAAAAGGGTATTTTGGTAATGCAATTATATTGTCAAATGCTATGTGTAAAGCAGGTGAATTATTGAAGAATCCATTATCATTTAGTGTGGAAGTGATTAAAAAATCAATTGAGATGGTAAGTGATAGTTACATGAGATCAGCTATTGATTACTTTGAAGTTAAGAGAAGTAAACCTTCTTTAACATCAACACTTTTGATTACAACATGGACTAGATTGTCTTTTCATGAAGCTGATTTTGGTTGGGGGAAACCTAGGAGTTTTTTTCCTGTTACTTTGCCACAAAAAGAAGTTATTTTGTTCTTACCATATGGTGAAAATACAAGAAGTATTAATGTGTTTGTGGGTTTGCCTGCTTCTACTATGAAAATATTTGAAAAGAATATGGAGATATGA 1290 0.3295 MANKMNIKLGEPTLVLPAEPTKKGLYYLSNLDQNIAYPVRTIYCYKSCSKGNEDVTKVIKDSLSKILVQYYPMAGRLTISSEGKLIIDCTEEGVVFVEAEANCMMEDLGDMTKPNNIEILRKLVYDIPNAKNLLEIPPLLIQVTKFKCGGFVLGVNVNHCMNDGISAMQFVNSWSDIARGLDLKIPPFLDRTILKPRNPPQIDFSHHEFAEIEDLSNTNKLIHEEEEMVYKSFYFNQNKLELLKKKATENGIVNKCSTFEALSAFVWRARTKTLNVHPNQEMKLLFAVDGRSKFVPQIPKGYFGNAIILSNAMCKAGELLKNPLSFSVEVIKKSIEMVSDSYMRSAIDYFEVKRSKPSLTSTLLITTWTRLSFHEADFGWGKPRSFFPVTLPQKEVILFLPYGENTRSINVFVGLPASTMKIFEKNMEI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05356 429 Gene3D - 1 211 IPR023213 -
Trre7g05356 429 Gene3D - 212 427 IPR023213 -
Trre7g05356 429 FunFam Tryptamine hydroxycinnamoyl transferase 213 428 - -
Trre7g05356 429 FunFam Spermidine hydroxycinnamoyl transferase 5 209 - -
Trre7g05356 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 424 - -
Trre7g05356 429 Pfam Transferase family 10 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05356 Trre-Chr7 59713358 59715753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05356 5 425 Monolignol Biosynthesis Gene Families AT5G48930 37.355 6.92e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05356 K15400 - gmx:100775546 619.772