Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05355 ATGAATTTTGTAAAGAAGTGTAAGAGAGTATTGGGCAAGAGATTGCATGATTCAGAAGAAAGTGGAAGTGGAAGAAGCTATGGCAAAATATTAGAGAACAAGTGTCACAAAAAGCAAAAGGATATTAATAATAAGAAACCACCAAATGGTTGTCTTTGTGTCTATGTTGGATCTGAGAGACAAAGATTCATAATCAAGATCAAAATATTCAATCATCCTTTGTTTAAAACACTTTTAGAAGATGTTGAGAATGAATATGGTTATAGAAATGATGGTCCTCTATGGCTTCCTTGTGATGTTGACTTTTTTTATGAGGCACTTGTTGAGATAGAGAGTGATGATATGGGTTTTGTGGGTTGCAATTTTCCAATAGTTCACAAACACAGCCCAGTTTCTCGTTCTTCATTTTCTTGTCGATCTTCTTATAACCTGAGTTGTGATGTAAATTACGAGATTTTGGTATAA 465 0.3376 MNFVKKCKRVLGKRLHDSEESGSGRSYGKILENKCHKKQKDINNKKPPNGCLCVYVGSERQRFIIKIKIFNHPLFKTLLEDVENEYGYRNDGPLWLPCDVDFFYEALVEIESDDMGFVGCNFPIVHKHSPVSRSSFSCRSSYNLSCDVNYEILV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05355 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 107 IPR003676 GO:0009733
Trre7g05355 154 Pfam Auxin responsive protein 6 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05355 Trre-Chr7 59709269 59709733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05355 48 108 Calmodulin-binding Proteins AT4G34750 42.623 3.59e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05355 K14488 - gmx:102667331 132.88