Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05354 ATGGATTTTGTGAAGAAGTGTAAGAGAGTATTGGGAAGCAACAAGAGATTATATGATTCAGAAGAAAGTTGTGGAAGTGGAAGAAGCTATGGCAAAATATCAGAGAACAAGTTTCAAAAAAAGCAAAAGGATATTAATAATAAGAAACCACCAAATGGTTGTCTTTGTGTCTATGTTGGATCTGAGAGACAAAGATTCATAATCAAGATCAAAATATTCAATCATCCTTTGTTTAAAACACTTTTAGAAGATGTTGAGAATGAATATGGTTATAGAAATGATGGTCCTCTATGGCTTCCTTGTGATGTTGACTTTTTTTATGAGGCACTTGTTGAGATAGAGAGTGCTATGGATCACAAGCACAACTCAGTTTCACATTCTTCACTGTCTTGTCGTTCTAATTATAACTTGAGTTCTGCTACCAATTATGAGATTTTGTTATAA 444 0.3311 MDFVKKCKRVLGSNKRLYDSEESCGSGRSYGKISENKFQKKQKDINNKKPPNGCLCVYVGSERQRFIIKIKIFNHPLFKTLLEDVENEYGYRNDGPLWLPCDVDFFYEALVEIESAMDHKHNSVSHSSLSCRSNYNLSSATNYEILL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05354 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 110 IPR003676 GO:0009733
Trre7g05354 147 Pfam Auxin responsive protein 29 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05354 Trre-Chr7 59701901 59702344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05354 51 111 Calmodulin-binding Proteins AT4G34750 42.623 1.87e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05354 K14488 - gmx:102667331 137.117