Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05353 ATGGATTTTGTGAAGAAGTGTAAGAGGGCATGTGGAAGAAGCAGCAAGAGATTGTATCCAGAAGAAAGTGGCAGTGGAAGCTGCAGCTATGACAAATTATCAGATAAGTGTCACAAAAAACAAAATGATATTAATAATAAGAAACCACCAAATGGTTATCTTTGTGTCTATGTTGGACCTGAGAGACAGAGATTTGTAATCAAGATCAAAGTATTCAATCATCCTTTGTTCAAAACACTTTTAGAAGATGTTGAGAATGAATATGGTTATAGAAACAATGGTCCTCTATGGTTTCCTTGTAATGTTGAGTTGTTCTGTGAGACACTTGTGGAAAAATAG 339 0.351 MDFVKKCKRACGRSSKRLYPEESGSGSCSYDKLSDKCHKKQNDINNKKPPNGYLCVYVGPERQRFVIKIKVFNHPLFKTLLEDVENEYGYRNNGPLWFPCNVELFCETLVEK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05353 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 109 IPR003676 GO:0009733
Trre7g05353 112 Pfam Auxin responsive protein 32 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05353 Trre-Chr7 59690886 59691224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05353 50 105 Calmodulin-binding Proteins AT3G43120 55.357 1.46e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05353 K14488 - gmx:102667331 123.25