Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05352 ATGGATTTTGTGAAGAAATGTAAGAGAGTATGGGGAAGCAACAAGAGATTACATAATCCAGAAGAAACTAGTAGTGGAAGCTATGGAAAATTATCAGAAAAGAGCAACAAAAAATTACAAAATAATAAAAAATTGGCACCAAATGGTTGTCTTTGTGTTTATGTTGGACCTGAGAGACAAAGATTCATAATCAAGATCAAAATATTCAATCATCCTTTGTTCAAAACATTTTTAGAAGATGTTGAGAATGAATATGGTTATAGAAATGATGGTCCTCTATGGTTTCCTTGTGATGTTGACTTGTTTTGTGAGACATTGATGGAGATGGAGAGTGATGATAATGTGGGTTGCAATTTTCAAAAGAGTCACAAGCATAACTTTGTTTCACCTTCTTCATTGTCTTGCCATTCTAATAACTTGAGTTGTAGTAGTGATGTTAATTACCAGCTTGTGGTATAA 459 0.329 MDFVKKCKRVWGSNKRLHNPEETSSGSYGKLSEKSNKKLQNNKKLAPNGCLCVYVGPERQRFIIKIKIFNHPLFKTFLEDVENEYGYRNDGPLWFPCDVDLFCETLMEMESDDNVGCNFQKSHKHNFVSPSSLSCHSNNLSCSSDVNYQLVV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05352 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 106 IPR003676 GO:0009733
Trre7g05352 152 Pfam Auxin responsive protein 27 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05352 Trre-Chr7 59687110 59687568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05352 46 102 Calmodulin-binding Proteins AT3G43120 50.877 3.37e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05352 K14488 - gmx:102667331 132.494