Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05351 ATGGATTTTGTGAAGAAGTGTAAGAGAGTATTGGGAAGCAACAAGAGATTGTATGATTCAGAAGAAAGCAGTGGAAGTGAAAGAAGCTATGGCAAAATATCTGAGAACAAGTTTCAAAAAAAGCAAAAGAATATTAATAATAAGAAACCACCAAATGGTTGTCTTTGTGTTTATGTTGGATCTGAGAGACAAAGATTTGTAATCAAGATCAAAATATTCAATCATCCTTTATTCAAAACACTTTTAGAAGATGTTGAGAATGAATATGGTTATAGAACTGATGGTCCTTTATGGCTTCCTTGTGATGTTGACTTTTTTTATGAGGCACTTGTTGAGATAGAGAGTGATGATATGGGTTTTGTGGGTTTTGGTATAGAGTTGTAA 384 0.3281 MDFVKKCKRVLGSNKRLYDSEESSGSERSYGKISENKFQKKQKNINNKKPPNGCLCVYVGSERQRFVIKIKIFNHPLFKTLLEDVENEYGYRTDGPLWLPCDVDFFYEALVEIESDDMGFVGFGIEL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05351 127 Pfam Auxin responsive protein 7 110 IPR003676 GO:0009733
Trre7g05351 127 MobiDBLite consensus disorder prediction 19 46 - -
Trre7g05351 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 110 IPR003676 GO:0009733
Trre7g05351 127 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05351 Trre-Chr7 59679311 59681491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05351 51 111 Calmodulin-binding Proteins AT4G34750 42.623 6.91e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05351 K14488 - gmx:102667331 127.872