Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05335 ATGGCAACAACACAACCTGAATTTGAACATCCTAACAAGGCCTTTGGTTTGGCAGCTAGAGACCCTTCTGGTCTTCTATCCCCTTTCAATTTCTCTAGAAGGGAAACCGGTGAAAAAGATGTTGCATTTAAAGTATTGTATTGTGGGATATGTCACTCTGATCTCCACATGGTGAAAAATGAATGGGGAATGTCAACCTATCCATTAGTTCCTGGGCATGAGATTGCTGGTATAGTGACAGAGGTGGGAAGCAAGGTACAAAAGTTCAAAGTTGGAGACAGAGTTGGTGTTGGCTGCATGGTTGATTCGTGTCGCACGTGCCAAAATTGCGAAGACAATCTTGAGAATTATTGTCCTCAATATACACTCACATATGGTGCAAAACATAGTGATGGCACAATCACATATGGCGGCTACTCTGACTCAATGGTTGCGAACGAGCATTTTGTGGTTCGCATTCCTGATAACTTACCACTTGAAGCTGCTGCTCCTCTGCTTTGTGCTGGTATCACAGTGTATAGTCCTCTTAAATATTTTGGACTCGACAAGCCCGGGCTTCATATCGGTGTTGTTGGGCTTGGCGGACTTGGTTATATGGCTGTGAAATTCGCCAAAGCTTTTGGTGCTAATGTCACAGTAATTAGCACATCGCCTAACAAAGAAAACGAAGCAATAGAACACTTAGGAGCCGATACATTTCTGATAAGTCGCGACCAAGATAAGATGCAGGCTACAGTAGGTACTTTGGATTTTATAATCGATACAGTTTCGGCGGCTCATCCTCTCTTACCTCTAATTGGATTACTGAAGTCTAATGGAAAGCTTTTGCAGGATGACATGGAACATTTTGGTGATGTTGGCTCCTTAGATGATAATGTGGAATCATTTCTCTCACAAGATGATGGTGATGGAAAGAACTTATTTGGGACATTGAAATGGAACCCTTCTGAGGATGCTATAGATGCTTCAAAAGCCTTTTCCTTCAGTGAAGTTAGTTCTATACGCAAAAGCAATGGAAAAGTTGTTTGCTATCATTTCTTGTCAGATGGGAAATTATTAGCTAGTGCTGGACATGACAAGAAGGTGTTGGCATGGTTTTCTGGTTTATCTGAAGATTAG 1119 0.4182 MATTQPEFEHPNKAFGLAARDPSGLLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNEWGMSTYPLVPGHEIAGIVTEVGSKVQKFKVGDRVGVGCMVDSCRTCQNCEDNLENYCPQYTLTYGAKHSDGTITYGGYSDSMVANEHFVVRIPDNLPLEAAAPLLCAGITVYSPLKYFGLDKPGLHIGVVGLGGLGYMAVKFAKAFGANVTVISTSPNKENEAIEHLGADTFLISRDQDKMQATVGTLDFIIDTVSAAHPLLPLIGLLKSNGKLLQDDMEHFGDVGSLDDNVESFLSQDDGDGKNLFGTLKWNPSEDAIDASKAFSFSEVSSIRKSNGKVVCYHFLSDGKLLASAGHDKKVLAWFSGLSED 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05335 372 Gene3D - 18 167 - -
Trre7g05335 372 CDD CAD1 15 275 IPR047109 GO:0016616
Trre7g05335 372 FunFam Uncharacterized protein 17 167 - -
Trre7g05335 372 Gene3D - 168 276 - -
Trre7g05335 372 SMART PKS_ER_names_mod 24 343 IPR020843 GO:0016491
Trre7g05335 372 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Trre7g05335 372 Pfam Zinc-binding dehydrogenase 195 275 IPR013149 -
Trre7g05335 372 FunFam Cinnamyl alcohol dehydrogenase 168 282 - -
Trre7g05335 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 276 IPR036291 -
Trre7g05335 372 SUPERFAMILY GroES-like 20 185 IPR011032 -
Trre7g05335 372 PANTHER ALDEHYDE REDUCTASE 6 276 IPR047109 GO:0016616
Trre7g05335 372 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05335 Trre-Chr7 59549028 59551949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05335 12 277 Monolignol Biosynthesis Gene Families AT4G37990 71.805 3.27e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05335 K23232 - gmx:100816901 458.759