Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05327 ATGTGGGACTCTACATTGCAGGAAAAACACCAACAAGATAAGGAATTGGAATTCGAAATCGAATGCGACGAGGAGGCTGAATCTGAAATTGAGGCACCATTGCCTCTCACAGTCACTTCGAGGGCTTTGTATATGTTGGGAGATATAGCTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAAACGCACTTCTAATTATCGCTCTTCTGGCTTTCCTCGTCATTCTTCAACCACCATGCTTTCTAATTCTAGCGTCAAAGAATCAATTGAGGATCCCAAATGTGATATACAGCCTGATCAAACTGGAATTAGCTTATGGGAGAGACTTGGGAAAGCTGCAATGTTGGATATCGAATCAGGCTCCTTTTCTTGGGATGATCTCTCTTCACTGCACCATACTGAACACAGCAGTAGTAATGAACATTCTGAAGATGAAATGAACAAAGCTCTTGAGGTAACCGTGAATTCTGGAGGTGTTGTCTTCTTTGCATTTTTCAATTGTCAAGGGAGTGATGATGCTTCTCCAAATGAGGCGGCAGCTGTTATAAAAATAGCATCATCAAGAATGGCAACTCAATCTGAACGCCTTGGATATGAATTGGCTAAGTGGCTGGGAATCCAAACTCCGCAGGCTAGAGTCATTCACAATACCAGTTCAGAATGGCAGCAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCGGCGGCAAGTTCTGGGAATGATGAAGTTGGTGAAGTGACATGTTTTGAACTTTTGGAAGCTCTTGAGCTAAGCCGATGTCTGTTTTTAATGAGTTATGTGCATGGTTCACCATTGCTTGAAAGCTCTAGTGCCTTTGAGCTACAGGAATCTGCAGAAAAAACAGCGGAAGCTCTTGGCAGGGTGCTGATGCTGGACTTAGTCATTCGAAATGAAGATAGGCTCCCTTGCCGTGAACTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGGCTGAAAAGATGCTCTCTGGAAATACAAATACACTAGAAGCCGCTTTGGATTCTGCAATTAATCAATATAGACCAAAGGTGATTAGGGCACTTCAAAAAGAAAGAAGGTCGAGTTCAGTAGATAGCAAATTGAATTCCCATAATCCCGGCTTGATCTCACAAGCCTCTGATCTTTCAGAGATCATAGATTCACCGAGATCCACTGACATGAGCCTTATAAGTCAAATGTCAGAAGAATCAATGTCTTCTGACCTTAACATTGTAGTCATTGATTCTGGTGTTCCTCGGCGACCCCCTGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGGTTGAGTTGCTGATCAATAGTTCCGAGTATGCATCAAACCTGTTAAATGATATAACTGGAGGGAAATTAGGATGTCCTCTACCAGAAGACATGGATGCAACTGATATACACGCAAGTGACATGACATCAATAGTTCATGCATTTCGTACTGGTTTCCGAGCTTCTCTTAGGGATCTACAGGGATTCCATATATTCCTACTCACCCTTCATCAAAGACTGGATACTTTGTTGCGATCATTCATGAACATTATAAGCAAACTATCTTCAGGGGAATCTGACAAGGAGGACTTACTGGTTCCTGACTCGCCTTCACTTGCTGGTTGTTCCTCTCCGACAAGTAAAGAGAGATATGATAATGATAACAATCAAGATATTACTGATTCGGAATCACAGAGAACTACTTCAAGGTCATTGTCTTCGTGTAATAGAGATTGTAGTGACTCAACTTCAGCGTCAAGAGAGAGTTGGCATGGAAGGTCCTGTAAAGGATATGGGGAGCTACAGCGTAATCTCCGTTTGACAGCCAAGCTCCGTGACTTTAATAAATATGCCAAGGTTGATGCTGAATCTAGTAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGACGCCGTCAAGCTATGCCAGGAGAACAATTTCAATACAGGATTTTTCGAGGGCAGTGAAAATAACAGTGTCATTGATGCATATGAACTGAAGGTCAGACTTGAACATATTCTTGAGAGAATTGCATTGATATCTGAGGCTGCAAGTACAGAGAAACCATCTGCTGTTACAAGCTATCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACTATGCAATACTTGGGAATCACACATATTTTGTGTTTGTGTACAAATGAAATTGGACAATCCGAAACTCAATTTCCTGATATATTTGAGTACAAAAATTTCTCGGTATGTGACAGTGAAGATTTTAACATCACCACTGTATTTGAAGAAGCGTGTGATTTTATAGATTGTGTTGAACAAAAAGGTCAGAAGATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGTGTTACATTGGTCCTTGCTTACCTAATGCTCAGGAAAAAGTATACTTTATTAAAAGCATGGCAAAAACTGAAACGAGTTCACCGTCGAGCACAGCCAAATGACGGTTTCGCAAAGATCTTACAAGAACTGGATCAGAAACTGCATGGGAAAGTTTCAATGGAGTGGCAGCATCGGAAACCAACCATGAAAGTTTGTCCCATCTGTGGAAAAAATGCTGGGTTAAGCAGTAGTTCACTTAAGTTACATTTGCAGAAATCACATAGAAAACTATCATCAGGTAGTGTAGATAGTGCCATGACAATGGAGATCCAAAAGGCATTAACAGCTTTGAAGATTAGCCGCAGTGGGAGTATCAGCCCCACGCAAAAGACTTCTCCAAACGGTAGCAGTTTATAG 2775 0.4137 MWDSTLQEKHQQDKELEFEIECDEEAESEIEAPLPLTVTSRALYMLGDIAAGPAFRFTQWLQLVRKRTSNYRSSGFPRHSSTTMLSNSSVKESIEDPKCDIQPDQTGISLWERLGKAAMLDIESGSFSWDDLSSLHHTEHSSSNEHSEDEMNKALEVTVNSGGVVFFAFFNCQGSDDASPNEAAAVIKIASSRMATQSERLGYELAKWLGIQTPQARVIHNTSSEWQQIKEATEKAREAAASSGNDEVGEVTCFELLEALELSRCLFLMSYVHGSPLLESSSAFELQESAEKTAEALGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLAEKMLSGNTNTLEAALDSAINQYRPKVIRALQKERRSSSVDSKLNSHNPGLISQASDLSEIIDSPRSTDMSLISQMSEESMSSDLNIVVIDSGVPRRPPAGKRANDQVNYPKLVELLINSSEYASNLLNDITGGKLGCPLPEDMDATDIHASDMTSIVHAFRTGFRASLRDLQGFHIFLLTLHQRLDTLLRSFMNIISKLSSGESDKEDLLVPDSPSLAGCSSPTSKERYDNDNNQDITDSESQRTTSRSLSSCNRDCSDSTSASRESWHGRSCKGYGELQRNLRLTAKLRDFNKYAKVDAESSKELEQWNEMLKNDAVKLCQENNFNTGFFEGSENNSVIDAYELKVRLEHILERIALISEAASTEKPSAVTSYLFIGGALAARSVYTMQYLGITHILCLCTNEIGQSETQFPDIFEYKNFSVCDSEDFNITTVFEEACDFIDCVEQKGQKILVHCFEGKSRSVTLVLAYLMLRKKYTLLKAWQKLKRVHRRAQPNDGFAKILQELDQKLHGKVSMEWQHRKPTMKVCPICGKNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRSGSISPTQKTSPNGSSL 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05327 924 MobiDBLite consensus disorder prediction 74 98 - -
Trre7g05327 924 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 697 842 IPR029021 -
Trre7g05327 924 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 24 918 IPR035010 GO:0004721|GO:0009737|GO:0043622
Trre7g05327 924 ProSiteProfiles Dual specificity protein phosphatase domain profile. 697 842 IPR020422 GO:0006470|GO:0008138
Trre7g05327 924 Pfam Actin-fragmin kinase, catalytic 108 423 IPR015275 -
Trre7g05327 924 SMART dsp_5 697 839 IPR020422 GO:0006470|GO:0008138
Trre7g05327 924 CDD DSP 698 835 - -
Trre7g05327 924 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 766 818 IPR000387 GO:0016311|GO:0016791
Trre7g05327 924 Gene3D - 277 411 IPR036940 -
Trre7g05327 924 Gene3D Protein tyrosine phosphatase superfamily 680 852 IPR029021 -
Trre7g05327 924 MobiDBLite consensus disorder prediction 568 598 - -
Trre7g05327 924 MobiDBLite consensus disorder prediction 74 92 - -
Trre7g05327 924 Pfam Dual specificity phosphatase, catalytic domain 712 838 IPR000340 GO:0008138|GO:0016311
Trre7g05327 924 MobiDBLite consensus disorder prediction 535 601 - -
Trre7g05327 924 SUPERFAMILY Protein kinase-like (PK-like) 59 436 IPR011009 -
Trre7g05327 924 FunFam Dual specificity protein phosphatase PHS1 669 843 - -
Trre7g05327 924 Gene3D - 117 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05327 Trre-Chr7 59484067 59489720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05327 21 906 Protein tyrosine phosphatase (PTP) family AT5G23720 64.934 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05327 K14165 - gmx:100799468 1398.65