Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05319 ATGTCTGAGATGAATGAACCAAATTCAGAGAAAGTTTGTGAAACTGTTGCTGAACCAAATTCAGAGAAAGTTTGTGAAACTAGTGGTGAGTCTCCAACTACACCAGTTGGAAAACAACCAGAAGAAGCTGAACCGAAAAGTAGTGAAAGAATCAAAGCTACAAGACATCCTAGATGGACAAGACAAGAAACACTTGTTCTAATTGAGGCAAAGAAAGTGATTGAAAATGGTGATCAAGTTTGCAGATACAGATCATCAACATCAGGGTTGGTTCAAACCGACCCGAAATGGGATTTGGTTTCATCATTGTGTCAACAACATGGTGTCAAAAGAGGAGCTGTTCAATGTAGGAAAAGATGGGGAAATCTTTTAACTGATTACAGGAAGATCAAGAAATGGGAGACGAATATAAAAAATGAGTCTGAGTCTTTTTGGATAATGAGAAATGATGTGAGGAAAGAAAATAAATTGCCTGGTTTCTTTGATGCTGTTGTGTACAATGTATTGGATGGAGGGGTTTGCACTGCTGCTGCATTTCCACTGACACTGATCAAAACTACGCCGAGAGTGGAGAATGGTGATCAGGTTGAAGGTGTGGCGGCGTTAGAGCAAGGTAATAAAGAGGATGAAATTGAGGAGGATGAGGATGAGGCTATTGTTGACAGTGACAAAATGGGTTGGAGCACTGAGGAGGAAAACATGGATACAAACACAAATGGAAATATGGTTAACAGTCCATTCAAAACACCAAATGCTAAGAAAACCAGCATTGGAGGGACTCTGAAAATGACACCAATCATACTGCCTAGTTCAACAGAGAGGCAGCAACAACCATTTTTCCAAGGGAACTACGATCCAGGGTGTCAGAGAGAACCTCTGTTCAATGAGGGATACAAAAGAAAGCGATTATCCCCAGGTGATTCTGAAGAAACCACAGATTTTAATGAAGATGTCATCAAAGTGCTAAGAAGGAATAGTAACATACTGAAAGCTCACCTTGGAGCTCAGAACATCAATTCCCAATTGGCCAGAGACCAGCAGAAGCAGCAAACAGATAGCTTAGTTTCAGCCCTTGGAAGGCTTACTGATGCTATCACAAAAATTGCAGACAAGATGTAA 1119 0.4066 MSEMNEPNSEKVCETVAEPNSEKVCETSGESPTTPVGKQPEEAEPKSSERIKATRHPRWTRQETLVLIEAKKVIENGDQVCRYRSSTSGLVQTDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDYRKIKKWETNIKNESESFWIMRNDVRKENKLPGFFDAVVYNVLDGGVCTAAAFPLTLIKTTPRVENGDQVEGVAALEQGNKEDEIEEDEDEAIVDSDKMGWSTEEENMDTNTNGNMVNSPFKTPNAKKTSIGGTLKMTPIILPSSTERQQQPFFQGNYDPGCQREPLFNEGYKRKRLSPGDSEETTDFNEDVIKVLRRNSNILKAHLGAQNINSQLARDQQKQQTDSLVSALGRLTDAITKIADKM 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05319 372 MobiDBLite consensus disorder prediction 1 53 - -
Trre7g05319 372 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 29 372 - -
Trre7g05319 372 MobiDBLite consensus disorder prediction 21 35 - -
Trre7g05319 372 ProSiteProfiles Myb-like domain profile. 58 124 IPR001005 -
Trre7g05319 372 MobiDBLite consensus disorder prediction 234 256 - -
Trre7g05319 372 Gene3D - 59 129 - -
Trre7g05319 372 Pfam Myb/SANT-like DNA-binding domain 57 145 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05319 Trre-Chr7 59398027 59400428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05319 58 199 Trihelix Transcription Factor Family AT5G03680 26.144 6.17e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre7g05319 Myb_DNA-bind_4 3.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05319 - - tpra:123916032 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05319 7 59398027 59400428 Trre7g05319 7 59398027 59400428 ECH