Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05275 ATGGCATCTGCAATAGTTCGTAGGAACATCACCAACAACTTGAAAAGGTTACCATCATTGTCTTGTTGGGGTTTCAACAACAATAATCATAATCATAATAATTTGTTGAATGTTGAAGAACATGCTGGTGGTAGTGGTACCGTTTCCTTTCACGCAGAAGCAGCTGGTGGTGTTGGATTGCCATCTTACATGCGTGGAGCTGTTTATTGGGAACCCAACAAACCTCTCACCATTGAAGAATTTCACATTCCTCGCCCCAAAGCTGGTGAACTTCTCATCAAAACCAAAGGATGTGGAGTATGCCACTCTGATCTTCATGTCATGAAAGGTGAAATTCCGTTTTCCAGTCCTTGTGTTGTGGGGCATGAGATTACTGGTGAAGTTGTTGAACATGGACAACACAGCGATTCCAAAACCATAGAAAGGCTTCCGGTTGGATCTCGAGTTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGTAACTATTGTTCAAAGGGCCATGATGATCTGTGTGAAGCCTTTTTTGCTTATAATCGAGCACAAGGAACCCTCTATGATGGTGAAACTCGACTATTTCTTCGAAGCAGTGGAAAACCGGTATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGTGTTGTGCCGGCAAATGCATTGTCTGTATTACCAAACTCAATGCCATATACCGAGTCTGCAATTTTAGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCTGAAGTTCGCCCGGGCGATACTGTTGCGGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCCTCGGATATAATTGCTGTCGATATTCAGGATGATAAGCTACAGAAAGCAAAGACACTTGGTGCAACTCACACAATAAATTCGGCAAAGGAAGATCCCGTTGAAAAGATACTTGAAATTACTGGTGGAAAGGGTGTTGACGTTGCTGTGGAAGCCTTGGGGAGACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGAGGAAGAGCCGTGATGATTGGACTAGCAAAAGCTGGTTCTTTAGGAGAGGTTGATATAAATAGACTTGTTCGCAGAAAGATAAAAGTTATTGGTTCATATGGAGGCAGGGCTAGGCAAGATCTTCCAAAGTTAATTAGATTGGCAGAAACGGGTATCTTTGACCTTGGCCATGCTGTTTCAAGAAAATACACTTTCGAGGAGTCTGGCAAAGCATTCCAGGATCTCAACGAAGGAAAGATCATTGGTCGAGCTGTAATCGAGATAGTATAG 1308 0.4365 MASAIVRRNITNNLKRLPSLSCWGFNNNNHNHNNLLNVEEHAGGSGTVSFHAEAAGGVGLPSYMRGAVYWEPNKPLTIEEFHIPRPKAGELLIKTKGCGVCHSDLHVMKGEIPFSSPCVVGHEITGEVVEHGQHSDSKTIERLPVGSRVVGAFIMPCGNCNYCSKGHDDLCEAFFAYNRAQGTLYDGETRLFLRSSGKPVFMYSMGGLAEYCVVPANALSVLPNSMPYTESAILGCAVFTAYGAMAHAAEVRPGDTVAVIGTGGVGSSCLQIARAFGASDIIAVDIQDDKLQKAKTLGATHTINSAKEDPVEKILEITGGKGVDVAVEALGRPQTFAQCTQSVKDGGRAVMIGLAKAGSLGEVDINRLVRRKIKVIGSYGGRARQDLPKLIRLAETGIFDLGHAVSRKYTFEESGKAFQDLNEGKIIGRAVIEIV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05275 435 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 226 399 IPR036291 -
Trre7g05275 435 FunFam Sorbitol dehydrogenase 241 379 - -
Trre7g05275 435 SMART PKS_ER_names_mod 71 432 IPR020843 GO:0016491
Trre7g05275 435 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 63 432 - -
Trre7g05275 435 FunFam Alcohol dehydrogenase (Zinc) 68 256 - -
Trre7g05275 435 Pfam Zinc-binding dehydrogenase 264 395 IPR013149 -
Trre7g05275 435 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 121 135 IPR002328 GO:0008270|GO:0016491
Trre7g05275 435 Gene3D - 68 424 - -
Trre7g05275 435 SUPERFAMILY GroES-like 59 267 IPR011032 -
Trre7g05275 435 Gene3D - 241 378 - -
Trre7g05275 435 Pfam Alcohol dehydrogenase GroES-like domain 89 219 IPR013154 -
Trre7g05275 435 CDD Zn_ADH10 64 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05275 Trre-Chr7 59069424 59072510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05275 78 353 Monolignol Biosynthesis Gene Families AT4G37970 27.046 2.75e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05275 - - gmx:100802431 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05275 7 59069424 59072510 Trre7g05275 7 59069424 59072510 ECH