Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05256 ATGATAGGAGGGTATAGGCGAAAGGCTATTGTAACATTAGTGAAGACTTGGATAGTAGTTTCGGCGGAAACCGGCGAAGCACGCGTCGAGGATGTCGATAAATACTCCATTATGCGACGAACAGGGTTACCAGCGCGTGATCTTAGAGTACTAGATCCACATCTTTCTAATCCTTCTTCAATCTTAGGAAGAGAAAGAGCCATTGTTGTTAATTTAGAACACATTAAAGCCATAATCACTTCTACCGAAGTGCTTATGATTAATTCCTCTAATCCTTTTTTTCTTCGCTTTCTTCAAGATCTTCAGGCTCGTGTTCCGCCTATTAATGATGTTAAAACGCGGACACAGATTAGTAATGACATCGTGGATGGTGATAGTGAAGTGAAACCTTTGTTGGATGAAAGGACGCCTTTGTTTCAGAGCCGTGACGATTGTGATGATTCTTCCAATAATGCATCGGAGGGAATCCCCGATGATTCTTCAAACAATGTGTCCGCGGCTCCTAAGCAGTTACCTTTCGAGTTCAAAGCGCTTGAGGCGTGTATTGAATCCGCTTGCACGTGCCTTGAATGCGAGACTCAAAAATTGGAAGATGAGGCTTACCCAGCTTTGGATGAATTGACCTCAGAAATTTCTACTCTCAATCTTGAACGTGTAAGGTTGATCAAGAATCGTTTGGTCGCACTTTCTGGTCGTGTGCAGAAGGTAGCAGATCAACTCGAACATTTGTTGGATGATGATAATGACATGGCTGAAATGTACTTGACACAAAAGCTCGATGATGGCTTATTGGATCAAACATCATTAAAAGAAGGATACAATTCAACATTTGATGAAAATATAAACGAAAGCGATGACTCAGATTCGGTTAACGACAAATCCTATGATTCTAAGCCTGATGTTGAGGAATTGGAGATGCTTTTAGAAGCATATTTTGCACAAATTAATGGCATATTGCAAAAATTGTTAAGTATGAGTGAGTATGTGGATGATACAGAAGACTACATCAACATAATGTTAGATGATAAGAGAAATGAGCTTCTACAAGTATCAATAACATTCAGCACAATAAACATGATAATCAATGCAGGTATTGTGGTTGTTGGATTGTTTGGCATGAATATTCACATTACTCTCTTTGATGGAGACCCTCATTATCAATATCCCACCGTAGTTGGTTGCACATTTGGAGGCTGCATATTGTTAACACTTGTTTCTATTTGGTGGGGTAGAAAAAGATATTTGCTTTCTGAATAG 1257 0.3946 MIGGYRRKAIVTLVKTWIVVSAETGEARVEDVDKYSIMRRTGLPARDLRVLDPHLSNPSSILGRERAIVVNLEHIKAIITSTEVLMINSSNPFFLRFLQDLQARVPPINDVKTRTQISNDIVDGDSEVKPLLDERTPLFQSRDDCDDSSNNASEGIPDDSSNNVSAAPKQLPFEFKALEACIESACTCLECETQKLEDEAYPALDELTSEISTLNLERVRLIKNRLVALSGRVQKVADQLEHLLDDDNDMAEMYLTQKLDDGLLDQTSLKEGYNSTFDENINESDDSDSVNDKSYDSKPDVEELEMLLEAYFAQINGILQKLLSMSEYVDDTEDYINIMLDDKRNELLQVSITFSTINMIINAGIVVVGLFGMNIHITLFDGDPHYQYPTVVGCTFGGCILLTLVSIWWGRKRYLLSE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05256 418 Gene3D Magnesium transport protein CorA, transmembrane region 97 347 - -
Trre7g05256 418 FunFam Magnesium transporter MRS2-E 130 347 - -
Trre7g05256 418 Coils Coil 204 224 - -
Trre7g05256 418 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 413 IPR039204 -
Trre7g05256 418 CDD Mrs2_Mfm1p-like 17 413 IPR039204 -
Trre7g05256 418 MobiDBLite consensus disorder prediction 275 296 - -
Trre7g05256 418 MobiDBLite consensus disorder prediction 139 164 - -
Trre7g05256 418 Gene3D - 9 90 - -
Trre7g05256 418 MobiDBLite consensus disorder prediction 143 164 - -
Trre7g05256 418 FunFam Magnesium transporter MRS2-1 5 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05256 Trre-Chr7 58926610 58928688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05256 16 416 MRS2 Gene Family AT3G19640 45.516 3.47e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05256 - K16075 gmx:100808805 498.049