Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05255 ATGTTGAAGTCCTTAACTTTACTCAGTATCATGTTGGTGATTGTTTCAATTACAATCCCTACACAAGGTCAAAAAGTTGATTGGAGTCCTACAAAAACAACTGTGCGTGTTTCAAATGATATGGGCACCAATGTTAATATGCATTGTAAATCATCAGACGATGATCTTGGCAGCCATGTTCTTGCTCAAGGTCAATACACAGAATGGTCTTTTCGTGCCAACATTCGTGGTACGACTCTATATTCTTGCGTCTTCAATTGGGACGGCGTGACAAAGAACGTCGTAATTTATGATGCTAAGAAGGACGAAGATGTGTGTATTACCAAATGTTGGCGAGTTCTTAGAACCGATGGAGCCTATTTTTATAATCAATACAAAAGTTCTTGGGATAAAAGATATGAATGGTAA 408 0.3799 MLKSLTLLSIMLVIVSITIPTQGQKVDWSPTKTTVRVSNDMGTNVNMHCKSSDDDLGSHVLAQGQYTEWSFRANIRGTTLYSCVFNWDGVTKNVVIYDAKKDEDVCITKCWRVLRTDGAYFYNQYKSSWDKRYEW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05255 135 Pfam Plant self-incompatibility protein S1 34 135 IPR010264 -
Trre7g05255 135 PANTHER - 31 129 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05255 Trre-Chr7 58925795 58926202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05255 13 135 Carbohydrate Esterase AT3G16970 32.353 1.58e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05255 - - mtr:25501956 231.106