Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05247 ATGTCTTTGCTTCCAAGCAGTGCCACTGATCACATTAACTTTGATGGTACTGAAAACTTTCAAAAGTTTTATGAGTGTTGGATGGTTGAACAAAACCAATATCTGAATGAACTTGTAGCAGCTAAATCAGCTCAACCTCAGCTCACAAATGACAGAATGCATGCACTGATTGATAAGGTTATTGAGCATTATGAGCATTACTACAAGGCAAAGTCAATTTGTGCAAAGAAAGATGTTTTGTCGATATTTTCACCACCATGGTTAAGCACTTTAGAAGAGGCTTTTCTTTGGATTGGTGGTTGGAGACCAAGCATGGCATTTCATTTGTTATATTCAAAATGCAGTATGCAATTTCAAGCAAGGTTAAATGACCTTATTCAAGGACAAAAAACATGTGACCTCGGAGATCTCTCGGCGTCTCAACTTGCTGAGTTCGATAATTTGCAAAAGAGGACTATTAGGGAAGAGAGGGAAATCGCTGATATGATGGCCGAGCATCAGGAGACGGTCGCCGATGCTCCGATGGTGGAGTTGTCTCATGTGGTTTCTGAGATGATTAGAGGAGGAGAGAATGAGAAGAAAGAATTGGAAGAGAGGATTGAATCAGTTCTTGAACCTAAGGTGGAAGGTTTGGAGAAGATTCTTCATAGAGCTGATGATTTAAGGCTGAGAGCATTGCAGGGCATTGTCAATATTCTGACTCCAAAACAAGCTATTTACTTCTTGATTGCTGCTGCAGAACTTCACCTGAGGCTGCATGAGTGGGGTAAAAAGAAGGATGATGCCAAAAGAGGCCAACAAGGTATTAGGGAGGGTGAAAGCCATAATTCCTGA 834 0.4113 MSLLPSSATDHINFDGTENFQKFYECWMVEQNQYLNELVAAKSAQPQLTNDRMHALIDKVIEHYEHYYKAKSICAKKDVLSIFSPPWLSTLEEAFLWIGGWRPSMAFHLLYSKCSMQFQARLNDLIQGQKTCDLGDLSASQLAEFDNLQKRTIREEREIADMMAEHQETVADAPMVELSHVVSEMIRGGENEKKELEERIESVLEPKVEGLEKILHRADDLRLRALQGIVNILTPKQAIYFLIAAAELHLRLHEWGKKKDDAKRGQQGIREGESHNS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05247 277 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 18 271 - -
Trre7g05247 277 Coils Coil 145 165 - -
Trre7g05247 277 Pfam Seed dormancy control 35 112 IPR025422 GO:0006351|GO:0043565
Trre7g05247 277 ProSiteProfiles DOG1 domain profile. 17 262 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05247 Trre-Chr7 58869585 58870418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05247 15 253 bZIP Transcription Factor Family AT5G06960 27.347 1.48e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05247 - - cam:101504084 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05247 7 58869585 58870418 Trre7g05247 7 58869585 58870418 ECH