Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05241 ATGCAAGGTGGATTAGAATTACCACCTGGGTTCAGATTTCACCCTACTGATGATGAGCTTGTGAATCACTACTTGTGTAGAAAGTGTGCTTCACTACCTATTTCTGTTCCAATTATCAAAGAAATTGATTTGTATAAATTTGATCCATGGCACCTTCCAGAAATGGCTCTTTATGGTGAGAAAGAATGGTATTTTTTCTCTCCAAGGGACAGAAAATATCCAAACGGTTCGCGGCCGAACCGGGCTGCGGGAACTGGATATTGGAAAGCCACCGGAGCCGATAAGCCGATTGGTAAGCCGAAGCCACTTGGAATAAAGAAAGCACTTGTGTTCTATGCTGGTAAAGCTCCCAAAGGTGTTAAAACCAATTGGATCATGCATGAGTATCGCCTTGCAAATGTTGATAGAACTGCATCAAAAAATAATCACAATTTAAGACTTGATGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAAAAATACAATGACACAAAACCATCAATGTTTTTAGAGGAAGTTCAATTTGAGAATGAGAAGAAGCCTAAGATCGAAATGAACGGCCAGGATGATTTCAGGATAATTAATGATCAATTATACACTGACACGTCAGATTCTGTGCCACAATTTCACACGGACTCAAGCTGTTCTGAGCACGTGGTTTCGCCGGATGTCACGTGCGATAAAGAGGTCCAAAGCGAGCCCAAATGGAATGAATTTGTTTTGGGCCCAGACCCAGTTTCAGCCTTTGATTTTCAATTGAATTTTATGGATGATGGTGAAGATGACTATTTTACCCCTCAGGTTCAGTATCAAATGAACAATAATAATCAGTTTTTGGGTTGGCAAGATGCGTTTATGTACCCACCTAAGTAA 885 0.4034 MQGGLELPPGFRFHPTDDELVNHYLCRKCASLPISVPIIKEIDLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKPLGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRTASKNNHNLRLDDWVLCRIYNKKGKIEKYNDTKPSMFLEEVQFENEKKPKIEMNGQDDFRIINDQLYTDTSDSVPQFHTDSSCSEHVVSPDVTCDKEVQSEPKWNEFVLGPDPVSAFDFQLNFMDDGEDDYFTPQVQYQMNNNNQFLGWQDAFMYPPK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05241 294 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Trre7g05241 294 FunFam NAC transcription factor 16 162 - -
Trre7g05241 294 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Trre7g05241 294 PANTHER NAC TRANSCRIPTION FACTOR 56 7 207 - -
Trre7g05241 294 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Trre7g05241 294 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05241 Trre-Chr7 58834378 58835582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05241 1 291 NAC Transcription Factor Family AT1G01720 62.925 1.44e-124 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g05241 NAM 8.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05241 - - gmx:100170751 461.455