Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05225 ATGATGGAGGTTGTGTTTGTGTTTGATGACGGCGACAATGACGGTGAGTCGGCGACGATGGAGGCTGTGTTTGCCTCTGGAGAACAAGGTGGGAGTATGGAAGTGAAGCTGATCAAATTTCAAAGCAACAATATATTTCTTGTGTTTATGAGAACGAAAAACCCTATAAGCTCGGCATCCGGCGCAGGAACCGTGTGTAATATTATGTATCCCGTGGCACATATTTCTAAGGTGAAAACCAAATATGGTATAGAGCCGGCTCCATATGTGGCTTCATTCTCATCGAGGGGCCCAAATTCTATTGACCCAGCAATTCTCAAGCCGGACATCACCGCACCAAGAGTAGGCATTATCGCTGCTTATGGTGGATCCGAGTGCGGTCCATTCATAAAGATGCCAGACACTTCAATGGCGTGTCCTCATGTTACTGGTGTTGCAGCATTGCTTAGATTCATTTATCCTAAGTGGAGTCCGGCTGCGATCAAATCAGCAATAATGACTACAGCAAGTGTAAGTGATACTTCCGGAAGTCCTATGATGCCAGATGATTTAACAAGTTGGAAAAGCGCAACTCCATTTGCGTATGGCGCGGCAATAACAGTTCCATATATTCATATTGGACATCCGGTGGTTCTTATGCGGATTGTTGAAAATGTTGGATGTCCGGGTAAGTATAGGGTGAAGGTCATTGCGCCTTCGGAACTGGGTGTTGTTGTTGAGCCTCAAATATTAGAATTTCAGTTTGTGGGTGAAAAGAAGCAATTTAGAGTCATATTAACTCTAAGGGACACTCCCGAAACGAAGGATTATGTTTTTGGAAGGTTGGTTGGGACAGACGACCATCCATTGAAATTTACAAGGTTGGTGTGCCAAAAGTATTGTGAAGCCATGAAGAAATTATTCGAAGTTATTTTGGAATTATTGGCCATTAGCTTAGTCACCATTCTTTTCCAAGACCAAGTTGGAGGTCTAGAAGCTTTTGTCGATAACAAATGGCTTGCTATTCGTCCTCAACCTAACACCTTTGTCATTAACATAGGTGACACTTTTAAGGCATTGACTAATGGAATATACAAGAATTGTCTCCATAGGGTATTGGCTAACAAAGAAATAGATAGAAAGACTTTGGCTTTCTTTTTGTGTCCAAAAGGAGACAAAATTGTAAGAGCACCAGATACAATATTAGGAAGACAAGAGTCAAGGAATTATCCTGATTTCACATGGTCACAATTTTTTGAGTTCACACAAAGAAAGCACAGAGCTGATCCAAACACTCTTCCAGATTTTGCATCATGGCTTAATTCCAACCCATCAAACATTTAA 1323 0.4165 MMEVVFVFDDGDNDGESATMEAVFASGEQGGSMEVKLIKFQSNNIFLVFMRTKNPISSASGAGTVCNIMYPVAHISKVKTKYGIEPAPYVASFSSRGPNSIDPAILKPDITAPRVGIIAAYGGSECGPFIKMPDTSMACPHVTGVAALLRFIYPKWSPAAIKSAIMTTASVSDTSGSPMMPDDLTSWKSATPFAYGAAITVPYIHIGHPVVLMRIVENVGCPGKYRVKVIAPSELGVVVEPQILEFQFVGEKKQFRVILTLRDTPETKDYVFGRLVGTDDHPLKFTRLVCQKYCEAMKKLFEVILELLAISLVTILFQDQVGGLEAFVDNKWLAIRPQPNTFVINIGDTFKALTNGIYKNCLHRVLANKEIDRKTLAFFLCPKGDKIVRAPDTILGRQESRNYPDFTWSQFFEFTQRKHRADPNTLPDFASWLNSNPSNI 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05225 440 Gene3D Peptidase S8/S53 domain 83 197 IPR036852 GO:0004252|GO:0006508
Trre7g05225 440 Pfam 2OG-Fe(II) oxygenase superfamily 311 382 IPR044861 -
Trre7g05225 440 ProSiteProfiles Serine proteases, subtilase domain profile. 1 210 - -
Trre7g05225 440 Pfam Subtilase family 76 173 IPR000209 GO:0006508|GO:0008236
Trre7g05225 440 Gene3D - 70 82 - -
Trre7g05225 440 Pfam Fibronectin type-III domain 206 279 IPR041469 -
Trre7g05225 440 Gene3D - 310 429 IPR027443 -
Trre7g05225 440 SUPERFAMILY Subtilisin-like 82 196 IPR036852 GO:0004252|GO:0006508
Trre7g05225 440 SUPERFAMILY Clavaminate synthase-like 283 421 - -
Trre7g05225 440 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 254 382 IPR005123 -
Trre7g05225 440 Gene3D - 202 286 - -
Trre7g05225 440 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 67 198 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05225 Trre-Chr7 58721316 58729643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05225 198 279 Subtilisin-like Serine Gene Family AT2G04160 45.122 1.17e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05225 K05282 - psat:127085440 201.445