Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05214 ATGGGGAGTGAAAGTAGTGTAAATCTTCCTCCTGGGTTTTATTTTTGTCCAACGGATGAAGAACTAGTCCTTCACTTTCTATATTCCAAGGCTTCTTTACCATATCATCCTAACATCATACCTGAACTTTACTTATCTCACTTTGATCCTTGGGAAATATACGGTAAATCGTTGTCAAGTGGAAATGAACACTACTTTTTCACCGAAGTGAATGAAAATAGAAGCACTGAAAATGGATATTGGAAGGAAATTGGGGTCACAAAACCTATAAATAATTTGGGAATGAAGAAATACCTTGTGTTCATCCTTGGGAAAGGAACTGAAACCAATTGGGTAATGGAAGAGTATCATATTTCCTCATATGAATCTAGGAGAGGTCAAAATCAGGATGAGAGTTGGAGCAAATGGGTTTTATGCAAAGTTTATGAAAAGAAGATGTCACAACAAGGTTCAAGTTATAATGATGAGGACATTGATGATAATGGAACAGAGGTATCATGGCTAGATGAAGTTTTTATGTCCTTAGATGATGATGATATTGATCAAACAACTCTACCTAATTAG 564 0.3564 MGSESSVNLPPGFYFCPTDEELVLHFLYSKASLPYHPNIIPELYLSHFDPWEIYGKSLSSGNEHYFFTEVNENRSTENGYWKEIGVTKPINNLGMKKYLVFILGKGTETNWVMEEYHISSYESRRGQNQDESWSKWVLCKVYEKKMSQQGSSYNDEDIDDNGTEVSWLDEVFMSLDDDDIDQTTLPN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05214 187 Gene3D NAC domain 18 148 IPR036093 GO:0003677|GO:0006355
Trre7g05214 187 Pfam No apical meristem (NAM) protein 10 118 IPR003441 GO:0003677|GO:0006355
Trre7g05214 187 PANTHER NAC TRANSCRIPTION FACTOR 56 9 154 - -
Trre7g05214 187 ProSiteProfiles NAC domain profile. 9 144 IPR003441 GO:0003677|GO:0006355
Trre7g05214 187 SUPERFAMILY NAC domain 6 144 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05214 Trre-Chr7 58646353 58647797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05214 1 145 NAC Transcription Factor Family AT1G77450 40.625 3.63e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre7g05214 NAM 7.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05214 - - mtr:11435699 327.791