Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05207 ATGCCGGCGTGGTGGAGTAGAAAGTCATCAAAGAACAAACAAGAGCGAGATATTAATAATAATAATGATGAAGAAGATGAAGAAGAACAATCACGTTCTGGTTCTGGAACTGGTGGTGTTCTTCAATTCAATTTCATGAAATCACCAATCAACGCAATAAGAAACAACAACAACAACAACGGTGATAGTATTAAGAAGAAAGAGAAGAAGAAGAAATCAAAGCCCAAGAGTTTTGATGAAGTTTTCAATCGGAATTCACCGAGGACTTGTAGAGAATTTGATGGCGGCGCCGCCACTCAAAACAAGGGACTTCCGTTACCTCTTCCTGTAAACACCGATCAAGGATCTCTTTCCGGTTCTGGTTCTAGCGTCAGTTCATCTACCTCTTTTAGTGATCATCCAATCTCTCCTCAATTCACTTCCAACAATAGAGGACAAGATGAGGTGAAGTTCAATGTTAGGCCAAAAAGTCCAGGTCCTGCGTCAAGAGGACCCACTAGTCCTACATCACCTCTTCATCCAAGGTTGCAGCAAAGTCTTGACTCACCTACGGGAAAGCAAGACGATGGAAGGAGTCAATGTCATCCATTGCCTCTTCCACCGGGATCTCCTACTAGTCCTTCTTCTGCTCTTTCCAACACACGGCCTAATGGACCGTTTGAAAATCCTATCCCTAACCTGTCCAAGTGGAAGAAAGGAAAGCTACTTGGCCGGGGAACATTTGGGCATGTTTATCTGGGATTTAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAGGCTTGGCTGTGATGATCAAACTTCAAATGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTTAAGGAGCTTTCACATCCAAACATTGTTCAATACTATGGGAGTGAACCGGGAGAGGAGTCACTTTCTGTTTATTTGGAATTTGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAATATGGCCCGTTCAAGGAGCCTGTCATTCAAAATTACACCAGGCAGATTGTTTCTGGACTTGCTTATTTACATGCAAGAAATACAGTACACAGGGATATCAAAGGGGCCAACATACTAGTTGATCCTAATGGTGAAATCAAATTAGCAGACTTTGGAATGGCTAAACATATAACTAATGCTGCCTCAATGCTCTCATTCAAAGGAAGTCCGTACTGGATGGCACCTGAGGTTGTAATGAACGCAAATGGCTATAGCCTTGCAGTTGATGTATGGAGCTTGGGATGCACACTTATTGAAATGGCAGCATCGAAGCCTCCATGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATTCCTGAGCATCTTTCAAATGATGCGAAGAATTTCATTATGTTATGCTTACAACGGGACCCATCAGCTCGCCCAACAGCCCAGAAATTACTAGAGCACCCCTTCATTAGAGATCAATCAGCAACAAAAGCTGCAACCAGAGATGTTTCCTCTTACATGTTTGATGGAAGCAGAACACCGCCTGTTTTAGAGCCCCATTCCAATAGAAGAAGTATAACTTCACTTGATGGAGACTATGCAACAAAGTCAGCTATTGCAGCTCCACGTGCAGTAAGGAGTCCAAGAGATCACACAAGAATGATCACATCTTTACCGGTATCTCCTTCTTCAAGCCCATTGCGACAGTATGGAACGGATCATAGGAGCTGTTTCTATTCTCCTCCTCATCCATCATACACAATAATGGGACAAAATAGTTACACTTTGAATGACACACCCTCTTATCCAGTGAGATCAAATGCAACATTTACTCTTGATCCCTGGCATGAAACATCCAGATACAAAGCCCACACACCACCTGGTGGGTCTCCAAGAATGAGATTCATTTGA 1899 0.425 MPAWWSRKSSKNKQERDINNNNDEEDEEEQSRSGSGTGGVLQFNFMKSPINAIRNNNNNNGDSIKKKEKKKKSKPKSFDEVFNRNSPRTCREFDGGAATQNKGLPLPLPVNTDQGSLSGSGSSVSSSTSFSDHPISPQFTSNNRGQDEVKFNVRPKSPGPASRGPTSPTSPLHPRLQQSLDSPTGKQDDGRSQCHPLPLPPGSPTSPSSALSNTRPNGPFENPIPNLSKWKKGKLLGRGTFGHVYLGFNSENGQMCAIKEVRLGCDDQTSNECLKQLNQEINLLKELSHPNIVQYYGSEPGEESLSVYLEFVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITNAASMLSFKGSPYWMAPEVVMNANGYSLAVDVWSLGCTLIEMAASKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIMLCLQRDPSARPTAQKLLEHPFIRDQSATKAATRDVSSYMFDGSRTPPVLEPHSNRRSITSLDGDYATKSAIAAPRAVRSPRDHTRMITSLPVSPSSSPLRQYGTDHRSCFYSPPHPSYTIMGQNSYTLNDTPSYPVRSNATFTLDPWHETSRYKAHTPPGGSPRMRFI 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05207 632 MobiDBLite consensus disorder prediction 105 148 - -
Trre7g05207 632 MobiDBLite consensus disorder prediction 33 60 - -
Trre7g05207 632 MobiDBLite consensus disorder prediction 1 229 - -
Trre7g05207 632 Pfam Protein kinase domain 231 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05207 632 MobiDBLite consensus disorder prediction 206 221 - -
Trre7g05207 632 ProSiteProfiles Protein kinase domain profile. 230 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05207 632 Gene3D Transferase(Phosphotransferase) domain 1 227 509 - -
Trre7g05207 632 SUPERFAMILY Protein kinase-like (PK-like) 227 566 IPR011009 -
Trre7g05207 632 MobiDBLite consensus disorder prediction 73 87 - -
Trre7g05207 632 FunFam Mitogen-activated protein kinase kinase kinase 228 507 - -
Trre7g05207 632 CDD STKc_MEKK1_plant 229 486 - -
Trre7g05207 632 ProSitePatterns Protein kinases ATP-binding region signature. 236 259 IPR017441 GO:0005524
Trre7g05207 632 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 5 498 - -
Trre7g05207 632 MobiDBLite consensus disorder prediction 168 189 - -
Trre7g05207 632 Coils Coil 11 31 - -
Trre7g05207 632 SMART serkin_6 230 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05207 Trre-Chr7 58625083 58629395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05207 1 545 MAP Kinase Kinase Kinase AT1G53570 53.659 2.37e-179 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre7g05207 Pkinase 1.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05207 K04421 - gmx:100787064 868.996