Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05148 ATGGCGAAATCATATGAAACGGAACTTCCACTGAAAGCTTTTGGTTGGGCTGCTTCAGATACCTCTGCCACCCTTTCTCCCTTCAATTTCTCTAGAAGAGAAAATGGCGATGATGATGTTACTCTCAAAATCCTATTCTGTGGTGTTTGTCATTCTGATCTACACACTATCAAGAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCAGGCCATGAAATTGTTGGGGAGGTGACAAAAATTGGAAACAATGTGAAAAATTTCAAAGTGGGGGATAAGGTTGGTGTTGGTGTGATGGTGGAGTCTTGTCAGACTTGTGAGAATTGCCAGCAGGATCTAGAGAATTACTGTCCTAAAATTGTATTCACCTACAACTCTCCTTATAAAGGGACACGAACCTATGGCGGCTATTCTGATTTCGTGGTTGTTCACCAGCGGTATGTACTCCAGTTTCCTGCGAACTTACCCCTTGCTGCTGGTGCTCCACTATTGTGTGCCGGGATCACTGTGTATAGCCCGATGATATATTATGGGATGACTGAGCCAGGCAAACATTTAGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTTGGTAAAGCATTTGGGCTGAAGGTTACTGTCATTAGTACCTCTCCAAACAAGAAAAGTGAGGCCATTGACAAACTTGGTGCCGATTCTTTCATTGTTTCCAAGGACCCTGAACAAATGAAGGCTGCTACCGGAACCATAGACTATATCATAGACACAATTTCTGCTGATCATTCCGTGTTGCCACTGCTTGGACTTCTGAAGCTGAATGGGAAGCTGGTCACTGTAGGGTTGCCAAGCAAGCCTCTTGAGCTCCCTGTCTTTCCGTTAGTTGCAGGGCGTAAGCTTATAGGGGGGAGCAACTTTGGCGGGATAAAGGAGACCCAGGAGATGCTTGATTTCTGCGCAAAGCATAACATAACTGCGGATATTGAGCTGATTAAAATGGACCAAATCAACACAGCAATGGAAAGGCTTAGCAAAGCTGATGTGAAATATCGCTTTGTGATTGATGTGGCCAACTCTTTCTCAACTTGCTTGTGTCGAGCCTTGGATGTTTCATTATACTGGGAAAAGCTAAGATTGGTATAA 1131 0.4447 MAKSYETELPLKAFGWAASDTSATLSPFNFSRRENGDDDVTLKILFCGVCHSDLHTIKNDWGFTTYPVVPGHEIVGEVTKIGNNVKNFKVGDKVGVGVMVESCQTCENCQQDLENYCPKIVFTYNSPYKGTRTYGGYSDFVVVHQRYVLQFPANLPLAAGAPLLCAGITVYSPMIYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKKSEAIDKLGADSFIVSKDPEQMKAATGTIDYIIDTISADHSVLPLLGLLKLNGKLVTVGLPSKPLELPVFPLVAGRKLIGGSNFGGIKETQEMLDFCAKHNITADIELIKMDQINTAMERLSKADVKYRFVIDVANSFSTCLCRALDVSLYWEKLRLV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05148 376 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Trre7g05148 376 Gene3D - 166 322 - -
Trre7g05148 376 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Trre7g05148 376 SUPERFAMILY GroES-like 23 184 IPR011032 -
Trre7g05148 376 Gene3D - 16 352 - -
Trre7g05148 376 FunFam probable cinnamyl alcohol dehydrogenase 16 179 - -
Trre7g05148 376 FunFam Cinnamyl alcohol dehydrogenase 166 322 - -
Trre7g05148 376 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Trre7g05148 376 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
Trre7g05148 376 CDD CAD1 14 351 IPR047109 GO:0016616
Trre7g05148 376 PANTHER ALDEHYDE REDUCTASE 6 355 IPR047109 GO:0016616
Trre7g05148 376 SMART PKS_ER_names_mod 20 350 IPR020843 GO:0016491
Trre7g05148 376 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05148 Trre-Chr7 58108892 58111798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05148 12 356 Monolignol Biosynthesis Gene Families AT2G21730 69.828 1.68e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05148 K00083 - gmx:100819684 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05148 7 58108892 58111798 Trre7g05148 7 58108892 58111798 ECH