Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05116 ATGTCTCAAATTGTTAATCACAACTTATATGAGGAGCAAAATCAGATTCCTACACAAATGGGGTTCATTCCTTTCCCAACAAACCTAACTTTTCCTTCTTTGGGTTGTAATAATCAATCTTTGAAAGCTTTAAGTTCCATGGCTTCTTCACTTACATCTGAATCAGCTGATTCTACATCAAATCTAACACAAACCCTACTCTCAAGTGCCAATCCTCAAAAATCATCAAGAGAATATCTCACTCCTAGCTTTGGAGGAACTCAATTCCTATCTTTGCAAAGATCAAGTGTAAATCCATGGGCAATATTGGGAGGAGTAAGTGATTGCTTGAATAATAGTGGTAAAAGAAGTGGAGTAGATCATGATCATAAATTGGGGATTTCTAGCATGAAAATGAAGAAAATGAAGGGAAGAAAAAAGGTGAGAGAACCTAGGTTTTGCTTCAAGACCTTAAGTACTGATGTGGATGTGTTGGATGATGGTTACAAATGGAGGAAGTATGGACAAAAAGTTGTGAAAAACACACAACACCCCAGAAGTTATTACCGTTGCACGCAAGAGAATTGTCGTGTAAAGAAGCGTGTGGAGCGCTTAGCTGAGGATCCAAGGATGGTAATAACCACGTACGAAGGAAGACATGCACACACTCCATCAAATGATCTTCATGACTCTCAAACTCAATCCGATAATTTCTTATGGTAG 702 0.3832 MSQIVNHNLYEEQNQIPTQMGFIPFPTNLTFPSLGCNNQSLKALSSMASSLTSESADSTSNLTQTLLSSANPQKSSREYLTPSFGGTQFLSLQRSSVNPWAILGGVSDCLNNSGKRSGVDHDHKLGISSMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHAHTPSNDLHDSQTQSDNFLW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05116 233 Gene3D WRKY domain 144 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g05116 233 SUPERFAMILY WRKY DNA-binding domain 153 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g05116 233 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 48 218 IPR044810 GO:0003700
Trre7g05116 233 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05116 233 MobiDBLite consensus disorder prediction 210 233 - -
Trre7g05116 233 FunFam WRKY transcription factor 57 143 218 - -
Trre7g05116 233 ProSiteProfiles WRKY domain profile. 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05116 233 Pfam WRKY DNA -binding domain 159 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05116 Trre-Chr7 57839579 57841730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05116 44 233 WRKY Transcription Factor Family AT4G39410 48.374 6.54e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g05116 WRKY 5.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05116 - - pvu:PHAVU_002G266400g 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05116 7 57839579 57841730 Trre7g05116 7 57839579 57841730 ECH