Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05107 ATGGACTACTATTTTGTAAACCCTCATGCTACTTCTAATTTTGCTCAATCAACTAATCATCATATGATTCCTAGTTCCTCTTCTCATCATGATTTTATACAACAACTATCTGATTATCTCATGCATGATGATATTTTTGTTGATCACCATGATCAAGAATCTCGAACACAAAGTACTAATGAATCATTAGAGAAGGTAACATCACAGAGTACTGAATCATTAGAGAAGGTAACATTCAGTGATGCTAGTCAAGGATTCAATGATGCAACCTCTAAGAACAATAACATAAAATACAAAAATGGGATTAAGCGAGAAGTGGGACCAAAGATAGCCTTTAGAACAAAATCAGAGATTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCAGTGAAGAACAATCTCAACTTAAGGAACTACTACAAATGTTCAAGTGTTGGATGCAAAGTGAAGAAAAGAGTGGAAAGAGATAGAGATGATTCGAGCTATGTGATAACAACTTATGAAGGTCTGCACAACCATGAGAGCCCATTTACCTCCTACTGTAGTCATATCTCCTTTGTGCATTGTGATCCATGA 591 0.3553 MDYYFVNPHATSNFAQSTNHHMIPSSSSHHDFIQQLSDYLMHDDIFVDHHDQESRTQSTNESLEKVTSQSTESLEKVTFSDASQGFNDATSKNNNIKYKNGIKREVGPKIAFRTKSEIEIMDDGYKWRKYGKKSVKNNLNLRNYYKCSSVGCKVKKRVERDRDDSSYVITTYEGLHNHESPFTSYCSHISFVHCDP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05107 196 ProSiteProfiles WRKY domain profile. 116 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05107 196 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 183 IPR044810 GO:0003700
Trre7g05107 196 SMART WRKY_cls 121 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05107 196 MobiDBLite consensus disorder prediction 51 70 - -
Trre7g05107 196 FunFam WRKY transcription factor 57 107 181 - -
Trre7g05107 196 Pfam WRKY DNA -binding domain 122 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g05107 196 SUPERFAMILY WRKY DNA-binding domain 113 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g05107 196 Gene3D WRKY domain 106 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05107 Trre-Chr7 57745245 57747194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05107 60 180 WRKY Transcription Factor Family AT5G64810 56.349 1.09e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g05107 WRKY 8.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05107 - - tpra:123913985 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05107 7 57745245 57747194 Trre7g05107 7 57745245 57747194 ECH