Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05099 ATGGATGATGATTTTTTTGATGATATTGCTCCTATTGTTCCTACTGCACGTGCTAAACCAGGTACAAGGTTTGCGCCGAAGGCAAAATCAAAATCGAAACAATCAGTTCAAAAGAATGTATCTGCGTCATCAGAAAATGCAATTTCATCTAAAGAGGGGAACAATGTGCTTGTTGATTCATCAACCACTCTCAAAGAATGTGGAGGAATTTCTCAGAATGAATCTCATAATGTAGTTGCTGCAAGTTCCTCAATTGAAGAACCTATAAGGTCTGGTCAAAATCCTGATATCGATGTCAATAACGTAACAGCACGACCAGTTCAGCCTGCTAATGCTGTAGAGAGTGTATTGAATAGTGTGGCTGCTCCATCTACTAATTGCGCAACCATAGGTAGGAACAAAGAAGTGGCTGTAAATGGAGAAGGTTCATTTCTTGATAGCAACAAGAGTTTGGAAGTAATTGATAATTCATTGGAAGTTAGCCTAAACGTGGGCTTCAAAAGTGCTTCAGCCGACAGTAACACTGGAATATCTGAGAGCAACATCCATTCAAATTTTGAGTTTGGAGAAATGCCACAGGTCTTGTCTTCGGAATTTGAGCTTGATCCTTTCAGCGATGATGTCCTCCCTGATCCCAGGCCCGGCACTAGGAATGCCAAAAAGTTTCAACCCAAGATTAAGCCACGGCCTAGAGTCAGCAATACACCAGCTACTGGTTCTGCTTCATCCGGTATTCCATTCTCTGAAGACAATAGAAGCATGGAAGCAGTTATTCCTTCTCATCCAGATTCCCTGAATGCTATGACATCAGAGGCTGTAGTCCATGATGGAACTAGAGATTTGCCTTCTAGCTTTGGTAAACCAGCTGCAGAGACTGCAGATATTTTTTCCGGGCTAGAATCACTTGATGACATTCTCAACCCAGCTGCAACTGGTACAGGAAAACCAGATCTTAAATCTTTCAATGTGAAGGGTGCAGAGGAAAATTTTGTCCTTCCAGGAGATGATAGCAAAAGTAGGACAGAAACACAGGAAGGCGCTGACTTGAATCCTGACTGCCCAATTGACAATGTCTATGATTATCAATCCATGAAATCAGCCACAGATCCAACGTCTGAAATTCCAAGGCAGGAAGGGTTGACAAATTCTGCAGATAGTCCCACATTGGCTGATTTTTTGCAGCAAGACGGTACTGGAGAGAAAGAAGATGCTAATGAGAGAAAAAAATCTGTAAGGAAGAATAAAAGATCGTCTAATGCTGGTGTGGAAGATAAAGGTGGTAAAACCTCAAAGAAGCCGAGAAAACAATCAGTTCGTAAACCTGCTAAAAACACATTGAATGAGCCTGTTCAGGATGATGATGATGTCCTCGACCCTCCTTATGAGTTTGATGGAGATGAACTTCAAGAAAATGACGACGAGGATGAAGTGGATAATTCATCCAAGAAAAGGACATCAACAAGTTCAAAGAAGAAATCTGTGGCTAAAAATGGAAAAACATCTAAAAAACGCAAGAAGGCTAATGATGATTTAGACAAGGTTACTGAAGAACCTCCTAAAAAGTTCTCACATTCATCTCGGCGTAGAAAAAGATGTGTGGACAAGGCTCTGTTGGATGATGACTATCTTGATCAACGAACATTACCTCTTAGGGATATTATTTTACTTGCTGAACATAAGGAGCGATTGGCAAAAAAGGAGGCAACAACTACTAATACATCTTCCACCAATCAAAGCGATGGGATTGGAGATTTTCGTCATGAGGCTGATGCTAACAATGAAGAGGAGTTTTATGGGTCAGATGATGGTTATAGAGACCCATATGATGGTCAATATCAAGCCAGTGAAAACATTACATCAACTGCTCCTTTATTGAATTACCAGTCATTCATGGACAAGGCACCTAGGGGAAAATGGTCAACAGGAGATACTGAAAAGTTTTATGAGGCTATTAGGCAGTTTGGCACAGATTTTACTATGATACAGCAGCTTTTCCCTGATAAAACACGTCATCAAATTAAGTTGAAGTACAAGAAAGAAGAGCGGCAACATCCTTTACTGTTATCTGATGCCGTGAATAATCCTACAAAAGATCTCTCTTTATTTAAATTGGTGATTGAGAGACAGATTCAAAAGTCTAAGGAAGAACAAGATGCCGCTGGAGATGCCTCAGATTTAATGCCTGGGGAGGAGGTTGAGGACCCGACACCTGAAACTAATGAAGAGGTTGCAACAGCTCAGCAGGAGCAGGACCACATTAATGTTAAAGATCAGGATGATTCTATGGCATATCCAGTTCCAGGGCAATCTGACGACGACAACGATGATGATGATGAAGATCCGTTACTAAAATGGTCTCAGTATCAAAGTTCTATTTAG 2379 0.409 MDDDFFDDIAPIVPTARAKPGTRFAPKAKSKSKQSVQKNVSASSENAISSKEGNNVLVDSSTTLKECGGISQNESHNVVAASSSIEEPIRSGQNPDIDVNNVTARPVQPANAVESVLNSVAAPSTNCATIGRNKEVAVNGEGSFLDSNKSLEVIDNSLEVSLNVGFKSASADSNTGISESNIHSNFEFGEMPQVLSSEFELDPFSDDVLPDPRPGTRNAKKFQPKIKPRPRVSNTPATGSASSGIPFSEDNRSMEAVIPSHPDSLNAMTSEAVVHDGTRDLPSSFGKPAAETADIFSGLESLDDILNPAATGTGKPDLKSFNVKGAEENFVLPGDDSKSRTETQEGADLNPDCPIDNVYDYQSMKSATDPTSEIPRQEGLTNSADSPTLADFLQQDGTGEKEDANERKKSVRKNKRSSNAGVEDKGGKTSKKPRKQSVRKPAKNTLNEPVQDDDDVLDPPYEFDGDELQENDDEDEVDNSSKKRTSTSSKKKSVAKNGKTSKKRKKANDDLDKVTEEPPKKFSHSSRRRKRCVDKALLDDDYLDQRTLPLRDIILLAEHKERLAKKEATTTNTSSTNQSDGIGDFRHEADANNEEEFYGSDDGYRDPYDGQYQASENITSTAPLLNYQSFMDKAPRGKWSTGDTEKFYEAIRQFGTDFTMIQQLFPDKTRHQIKLKYKKEERQHPLLLSDAVNNPTKDLSLFKLVIERQIQKSKEEQDAAGDASDLMPGEEVEDPTPETNEEVATAQQEQDHINVKDQDDSMAYPVPGQSDDDNDDDDEDPLLKWSQYQSSI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05099 792 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 20 791 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 331 345 - -
Trre7g05099 792 Pfam Myb DNA-binding like 629 713 IPR039467 -
Trre7g05099 792 ProSiteProfiles SANT domain profile. 638 682 IPR017884 -
Trre7g05099 792 MobiDBLite consensus disorder prediction 568 582 - -
Trre7g05099 792 SMART sant 635 683 IPR001005 -
Trre7g05099 792 MobiDBLite consensus disorder prediction 202 250 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 361 393 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 1 54 - -
Trre7g05099 792 CDD SANT 638 679 IPR001005 -
Trre7g05099 792 Gene3D - 639 717 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 233 249 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 713 792 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 486 502 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 451 475 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 28 54 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 503 523 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 396 431 - -
Trre7g05099 792 SUPERFAMILY Homeodomain-like 637 685 IPR009057 -
Trre7g05099 792 MobiDBLite consensus disorder prediction 565 591 - -
Trre7g05099 792 MobiDBLite consensus disorder prediction 329 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05099 Trre-Chr7 57703683 57709461 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre7g05099 Myb_DNA-bind_7 2e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05099 K15198 - gmx:100792788 608.601