Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05097 ATGGATGATGATTTTTTTGATGATATTGCTCCTATTGTTCCTACTGCACGTGCTAAACCAGGTACAAGGTTTGCGCCGAAGGCAAAATCAAAATCGAAACAATCAGTTCAAAAGAATGTATCTGCGTCATCAGAAAATGCAATTTCATCTAAAGAGGGGAACAATGTGCTTGTTGATTCATCAACCACTCTCAAAGAATGTGGAGGAATTTCTCAGAATGAATCTCATAATGTAGTTGCTGCAAGTTCCTCAATTGAAGAACCTATAAGGTCTGGTCAAAATCCTGATATCGATGTCAATAACGTAACAGCACGACCAGTTCAGCCTGCTAATGCTGTAGAGAGTGTATTGAATAGTGTGGCTGCTCCATCTACTAATTGCGCAACCATAGGTAGGAACAAAGAAGTGGCTGTAAATGGAGAAGGTTCATTTCTTGATAGCAACAAGAGTTTGGAAGTAATTGATAATTCATTGGAAGTTAGCCTAAACGTGGGCTTCAAAAGTGCTTCAGCCGACAGTAACACTGGAATATCTGAGAGCAACATCCATTCAAATTTTGAGTTTGGAGAAATGCCACAGGTCTTGTCTTCGGAATTTGAGCTTGATCCTTTCAGCGATGATGTCCTCCCTGATCCCAGGCCCGGCACTAGGAATGCCAAAAAGTTTCAACCCAAGATTAAGCCACGGCCTAGAGTCAGCAATACACCAGCTACTGGTATTCCATTCTCTGAAGACAATAGAAGCATGGAAGCAGTTATTCCTTCTCATCCAGATTCCCTGAATGCTATGACATCAGAGGCTGTAGTCCATGATGGAACTAGAGATTTGCCTTCTAGCTTTGGTAAACCAGCTGCAGAGACTGCAGATATTTTTTCCGGGCTAGAATCACTTGATGACATTCTCAACCCAGCTGCAACTGGTACAGGAAAACCAGATCTTAAATCTTTCAATGTGAAGGGTGCAGAGGAAAATTTTGTCCTTCCAGGAGATGATAGCAAAAGTAGGACAGAAACACAGGAAGGCGCTGACTTGAATCCTGACTGCCCAATTGACAATGTCTATGATTATCAATCCATGAAATCAGCCACAGATCCAACGTCTGAAATTCCAAGGCAGGAAGGGTTGACAAATTCTGCAGATAGTCCCACATTGGCTGATTTTTTGCAGCAAGACGGTACTGGAGAGAAAGAAGATGCTAATGAGAGAAAAAAATCTGTAAGGAAGAATAAAAGATCGTCTAATGCTGGTGTGGAAGATAAAGGTGGTAAAACCTCAAAGAAGCCGAGAAAACAATCAGTTCGTAAACCTGCTAAAAACACATTGAATGAGCCTGTTCAGGATGATGATGATGTCCTCGACCCTCCTTATGAGTTTGATGGAGATGAACTTCAAGAAAATGACGACGAGGATGAAGTGGATAATTCATCCAAGAAAAGGACATCAACAAGTTCAAAGAAGAAATCTGTGGCTAAAAATGGAAAAACATCTAAAAAACGCAAGAAGGCTAATGATGATTTAGACAAGGTTACTGAAGAACCTCCTAAAAAGTTCTCACATTCATCTCGGCGTAGAAAAAGATGTGTGGACAAGGCTCTGTTGGATGATGACTATCTTGATCAACGAACATTACCTCTTAGGGATATTATTTTACTTGCTGAACATAAGGAGCGATTGGCAAAAAAGGAGGCAACAACTACTAATACATCTTCCACCAATCAAAGCGATGGGATTGGAGATTTTCGTCATGAGGCTGATGCTAACAATGAAGAGGAGTTTTATGGGTCAGATGATGGTTATAGAGACCCATATGATGGTCAATATCAAGCCAGTGAAAACATTACATCAACTGCTCCTTTATTGAATTACCAGTCATTCATGGACAAGGCACCTAGGGGAAAATGGTCAACAGGAGATACTGAAAAGTTTTATGAGGCTATTAGGCAGTTTGGCACAGATTTTACTATGATACAGCAGCTTTTCCCTGATAAAACACGTCATCAAATTAAGTTGAAGTACAAGAAAGAAGAGCGGCAACATCCTTTACTGTTATCTGATGCCGTGAATAATCCTACAAAAGATCTCTCTTTATTTAAATTGGTGATTGAGAGACAGATTCAAAAGTCTAAGGAAGAACAAGATGCCGCTGGAGATGCCTCAGATTTAATGCCTGGGGAGGAGGTTGAGGACCCGACACCTGAAACTAATGAAGAGGTTGCAACAGCTCAGCAGGAGCAGGACCACATTAATGTTAAAGATCAGGATGATTCTATGGCATATCCAGTTCCAGGGCAATCTGACGACGACAACGATGATGATGATGAAGATCCGTTACTAAAATGGTCTCAGTATCAAAGTTCTATTTAG 2364 0.4082 MDDDFFDDIAPIVPTARAKPGTRFAPKAKSKSKQSVQKNVSASSENAISSKEGNNVLVDSSTTLKECGGISQNESHNVVAASSSIEEPIRSGQNPDIDVNNVTARPVQPANAVESVLNSVAAPSTNCATIGRNKEVAVNGEGSFLDSNKSLEVIDNSLEVSLNVGFKSASADSNTGISESNIHSNFEFGEMPQVLSSEFELDPFSDDVLPDPRPGTRNAKKFQPKIKPRPRVSNTPATGIPFSEDNRSMEAVIPSHPDSLNAMTSEAVVHDGTRDLPSSFGKPAAETADIFSGLESLDDILNPAATGTGKPDLKSFNVKGAEENFVLPGDDSKSRTETQEGADLNPDCPIDNVYDYQSMKSATDPTSEIPRQEGLTNSADSPTLADFLQQDGTGEKEDANERKKSVRKNKRSSNAGVEDKGGKTSKKPRKQSVRKPAKNTLNEPVQDDDDVLDPPYEFDGDELQENDDEDEVDNSSKKRTSTSSKKKSVAKNGKTSKKRKKANDDLDKVTEEPPKKFSHSSRRRKRCVDKALLDDDYLDQRTLPLRDIILLAEHKERLAKKEATTTNTSSTNQSDGIGDFRHEADANNEEEFYGSDDGYRDPYDGQYQASENITSTAPLLNYQSFMDKAPRGKWSTGDTEKFYEAIRQFGTDFTMIQQLFPDKTRHQIKLKYKKEERQHPLLLSDAVNNPTKDLSLFKLVIERQIQKSKEEQDAAGDASDLMPGEEVEDPTPETNEEVATAQQEQDHINVKDQDDSMAYPVPGQSDDDNDDDDEDPLLKWSQYQSSI 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05097 787 MobiDBLite consensus disorder prediction 306 531 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 498 518 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 1 54 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 560 586 - -
Trre7g05097 787 Pfam Myb DNA-binding like 624 708 IPR039467 -
Trre7g05097 787 SMART sant 630 678 IPR001005 -
Trre7g05097 787 MobiDBLite consensus disorder prediction 563 577 - -
Trre7g05097 787 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 20 786 - -
Trre7g05097 787 ProSiteProfiles SANT domain profile. 633 677 IPR017884 -
Trre7g05097 787 MobiDBLite consensus disorder prediction 708 787 - -
Trre7g05097 787 Gene3D - 634 712 - -
Trre7g05097 787 CDD SANT 633 674 IPR001005 -
Trre7g05097 787 MobiDBLite consensus disorder prediction 446 470 - -
Trre7g05097 787 SUPERFAMILY Homeodomain-like 632 680 IPR009057 -
Trre7g05097 787 MobiDBLite consensus disorder prediction 391 426 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 326 340 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 28 54 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 356 388 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 481 497 - -
Trre7g05097 787 MobiDBLite consensus disorder prediction 207 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05097 Trre-Chr7 57703683 57709461 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre7g05097 Myb_DNA-bind_7 2e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05097 K15198 - gmx:100792788 605.134