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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Trre7g05083
ATGGCAGGTAATAAGAGAAACCAAACAAGTCCTGTAGGAAGTCCAACATCAGGAAACATCTCAGACAGTTCATCCTCAAAAGAACAAGACAGGTTTCTACCAATTGCTAACGTAAGCCGTATAATGAAAAGAGCACTACCAGCAAATGCTAAAATATCAAAAGAAGCTAAAGAAACTGTTCAAGAATGTGTTTCTGAGTTCATAAGTTTCATTACTGGTGAAGCTTCTGATAAGTGTCAAAGAGAAAAGAGAAAAACAATTAATGGTGATGATCTTCTTTGGGCTATGACAACACTTGGTTTTGAAAATTATGTTGGTCCTTTGAAAGTTTATCTTAATAATTATAGAGAAACTGAAGGAGAAAAGAGTAATAATAATTCTTCTTCTTCTTCTATGGTTACTAGTACTAAACAAGATGATTATGATCTTAATAATTCTTTAATTGAAGTTAATCATGATGTTGTTGTTGGTGGTGGATTTTATTCTCAAGTTATTAATGGAAGGATAGTGGATGAAACAGAACATGCAATTGGTAGTGGTAATAGAATCATGCCACCAAACCTTCGTTATAGGGTTGAATGGTAG
585
0.335
MAGNKRNQTSPVGSPTSGNISDSSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYRETEGEKSNNNSSSSSMVTSTKQDDYDLNNSLIEVNHDVVVGGGFYSQVINGRIVDETEHAIGSGNRIMPPNLRYRVEW
194
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Trre7g05083
194
PANTHER
CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED
16
137
IPR027113
GO:0001228|GO:0006355|GO:0016602
Trre7g05083
194
Pfam
Histone-like transcription factor (CBF/NF-Y) and archaeal histone
32
96
IPR003958
-
Trre7g05083
194
Gene3D
Histone, subunit A
19
151
IPR009072
GO:0046982
Trre7g05083
194
ProSitePatterns
NF-YB/HAP3 subunit signature.
63
79
IPR003956
GO:0005634|GO:0006355|GO:0043565
Trre7g05083
194
MobiDBLite
consensus disorder prediction
1
32
-
-
Trre7g05083
194
FunFam
Nuclear transcription factor Y subunit B-3
21
145
-
-
Trre7g05083
194
SUPERFAMILY
Histone-fold
29
149
IPR009072
GO:0046982
Trre7g05083
194
PRINTS
CCAAT-binding transcription factor subunit A signature
98
116
-
-
Trre7g05083
194
PRINTS
CCAAT-binding transcription factor subunit A signature
60
78
-
-
Trre7g05083
194
PRINTS
CCAAT-binding transcription factor subunit A signature
79
97
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Trre7g05083
Trre-Chr7
57620412
57620996
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Trre7g05083
24
123
CCAAT-HAP3 Transcription Factor Family
AT4G14540
89.000
5.77e-64
193
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YB
Trre7g05083
CBFD_NFYB_HMF
9.4e-27
CL0012
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Trre7g05083
K08065
-
gmx:100797721
255.373
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Trre7g05083
7
57620412
57620996
Trre7g05083
7
57620412
57620996
ECH
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