Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05077 ATGATTTTGATCTGTATATCAATTTTTCTAGTTTCTTTTCTAGCTTGTCTATGGCTATGGAGAACCATGAAAAAATCAAAGAGATTACCACCAGGTCCAAAAGGATTACCAATTTTGGGTAGCCTTCTAAAATTAGGACCAAACCCTCATCTTGATCTTCACAAACTATCCCAAAAATATGGATCAATCATGCACTTACGCTTAGGTTTAGTACCAACCATAGTTGTTTCTTCACCTCAAGCAGCTGAACTTTTCCTTAAAACTCATGATCTTGTCTTTGCAAGTAGACCACCAGCTGAAGCAGCAAAATTTATCTCTTGGGATCAGAAGAACATCACTTTTGGTGAATATGGTTCTTATTGGCGCAACATGAGAAAAATGTGTACTTCAGAATTATTGAGTCATGCAAAAATCAATTCTTTTAGAACTATGAGGGAACAAGAACTTGACCTATTGATAAATATTCTAAGAGCCAACGATGGAAAAGAGGTTGATTTAAGTTCTAAGATTTCTTCACTAAGTGCTGATATGAGTTGTAGAATGGTTTTGGGGAGAAAATATTTGGATAATGATTTGGATCAAAAAGGGTTTAAGGCTGTGATACAAGAGGGGATGCATTTAGCAGCTACTCCTAATCTTGCTGATTATATTCCTTATATTGGACAATTTGATTTCCAAGGGCTAACTAAGCCTATGAAGGCAATTGGAAAAATCTATGATGACTTTTTTGAGAAAATTATTGATGAACATATCCAATCCGACAATAAAGATGATAATAATAAGGATTTTGTAGATGTTATGTTGAGCTTTGTTGGTACTCAAGAATCTGAATATCGTATTGAACGACCCAACATCAAAGCCATAATGCTGGATATGTTAGTGGGTTCAATGGATACTTCTGCAACTGCAATTGAATGGACAATTTCAGAACTACTAAAGAATCCAAGAGTGATGAAAAAAGTTCAAAATGAGTTGGAAGTTATGGTGGGTATGAAGAGAAGAGTGGAGGAATCAGATTTGATCAAGTTGGAATACTTGGACATGGTTATAAAAGAAAGTTTTAGGCTTCATCCAGTAGCACCATTATTAATTCCACACCAATCCTTAGAAGATTGTTTGGTTGAAGATTTTTTCATACCTAAAAAATCAAGGGTCATTGTGAATGCATGGTCAATTATGAGAGATCCAAATGCTTGGACTGATCCTGAAAGGTTTTGGCCTGAGAGATTTGAAGGAAGTAATATAGATGTTAGAGGGCATGATTTTCAACTCATACCATTTGGCTCTGGTAGAAGAGGTTGTCCTGGATTACAATTGGGCCTAACTGTGATACGTTTAGTAGTGGCCCAACTTGTGCATTGCTTTGATTGGAAACTGCCAAATCACATGTTACCAAGTGATTTAGACATGACAGAAGAGTTTGGTCTTACAATGCCTAGAGCCAGTCATTTAATTGTCATCCCTGTTTATCGCCTTTGTAGTGATTGTGATTAG 1494 0.3608 MILICISIFLVSFLACLWLWRTMKKSKRLPPGPKGLPILGSLLKLGPNPHLDLHKLSQKYGSIMHLRLGLVPTIVVSSPQAAELFLKTHDLVFASRPPAEAAKFISWDQKNITFGEYGSYWRNMRKMCTSELLSHAKINSFRTMREQELDLLINILRANDGKEVDLSSKISSLSADMSCRMVLGRKYLDNDLDQKGFKAVIQEGMHLAATPNLADYIPYIGQFDFQGLTKPMKAIGKIYDDFFEKIIDEHIQSDNKDDNNKDFVDVMLSFVGTQESEYRIERPNIKAIMLDMLVGSMDTSATAIEWTISELLKNPRVMKKVQNELEVMVGMKRRVEESDLIKLEYLDMVIKESFRLHPVAPLLIPHQSLEDCLVEDFFIPKKSRVIVNAWSIMRDPNAWTDPERFWPERFEGSNIDVRGHDFQLIPFGSGRRGCPGLQLGLTVIRLVVAQLVHCFDWKLPNHMLPSDLDMTEEFGLTMPRASHLIVIPVYRLCSDCD 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05077 497 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 Pfam Cytochrome P450 30 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 Gene3D Cytochrome P450 20 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 CDD CYP71-like 59 484 - -
Trre7g05077 497 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS E-class P450 group I signature 173 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 PANTHER CYTOCHROME P450 93A3-LIKE 3 492 - -
Trre7g05077 497 FunFam Cytochrome P450 83B1 17 487 - -
Trre7g05077 497 SUPERFAMILY Cytochrome P450 30 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05077 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05077 Trre-Chr7 57575982 57577652 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05077 2 496 Cytochrome P450 AT5G07990 39.364 1.33e-129 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05077 K20562 - gmx:100809526 768.074