Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05066 ATGTTCCAGTTGCAGCTTTCTATTCAACGAGCAAAGTTGAAGTTTCTTATGCCTCAGATATCTGCTTTGGGAAGTTCCCATTTCTCAATAACTGCTCAACCATTTTCCAGTAAACGCATTGCTCCGAGGGTTCCAAATCTTATTGGGGGAAGATTTCTCGACTCAAAATCATCAAATTCCATTGATGTTATAAACCCAGCAACACAAGAAGTTGTGTCACAAGTTCCATTGTCTACAGATGAAGAGTTTAAAGCTGCTGTATCTGCAGCAAAGAATGCATTTCCATCATGGCGTAACACTCCAGTTACGACACGTCAACGTGTTATGTTGAAGCTCCAGGAGCTCATACGCAGAGATATGGATAAACTCGCTCTTAACGTGACCACCGAACAAGGAAAGACACTGAAGGATGCACAAGGAGATGTGTTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGGAACTCTACAAATGGGAGAGTATGTTTCGAATGTATCTAATGGAGTCGACACCTACAGCGTTAGAGAACCAATTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCGATGATTCCCTTGTGGATGTTCCCCTTGGCTGTTACCTGTGGCAATACCTTTGTTCTAAAACCGTCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAGTTGGCATTGGAGGCTGGTTTACCTGACGGTGTCTTAAATATTGTTCATGGAACCCATGATATTGTGAATGCCATTTGTGACGATGACGATATCAAAGCCATATCATTTGTTGGTTCGAATGTTGCTGGAATGCACATATATTCAAGAGCAGCTGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTATAAATGCATTAGTTGCTGGTGGTTTTGGAGCTGCTGGACAGAGGTGCATGGCTCTCAGCACAGTTATTTTTGTGGGAGGCTCGCAATCATGGGAAACTAAAATTTTAGAGCGTGCCAAAGCTCTTAAAGTAAATGCTGGAATTGAACCTGATTCAGATCTTGGTCCGGTCATCAGCAAACAAGCAAAGGAGCGAGTGAACATGTTAGTTCAATCTGGGGTTGAAAGCGGTGCCAAACTACTCCTTGATGGAAGAAATATTGTGGTCCCAGGATATGAATCTGGCAATTTTGTTGGTCCAACCATCTTATCAAATATCACTACCAACATGGAATGCTACCAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGATAGCTTGGAAGAGGCCATAAATATTATCAACAAAAACAAGTATGGAAATGGTGCTTCTATATTTACTACTTCTGGTGTTTCTGCAAGGAAATTTCAGACTGAGATTGAGGCCGGACAGGTTGGCATCAACGTTCCTATTCCAGTTCCTTTGCCATTTTTCTCATTTACCGGCAACAAGGCGTCATTTGCTGGCGATCTCAATTTCTATGGCAAAGCAGGGGTTAACTTTTATACACAGATCAAAACAATAACACAGCTGTGGAAGGATTCAGTTGGTGGTAGCAAGATTAACTTGGCAATGCCAACCTCTCAAAAATCTTGA 1620 0.4247 MFQLQLSIQRAKLKFLMPQISALGSSHFSITAQPFSSKRIAPRVPNLIGGRFLDSKSSNSIDVINPATQEVVSQVPLSTDEEFKAAVSAAKNAFPSWRNTPVTTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMGTLQMGEYVSNVSNGVDTYSVREPIGVCAGICPFNFPAMIPLWMFPLAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPDGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATINALVAGGFGAAGQRCMALSTVIFVGGSQSWETKILERAKALKVNAGIEPDSDLGPVISKQAKERVNMLVQSGVESGAKLLLDGRNIVVPGYESGNFVGPTILSNITTNMECYQEEIFGPVLLFMEADSLEEAINIINKNKYGNGASIFTTSGVSARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQLWKDSVGGSKINLAMPTSQKS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05066 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 6 536 IPR010061 GO:0004491
Trre7g05066 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 289 489 IPR016163 GO:0016620
Trre7g05066 539 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 289 489 - -
Trre7g05066 539 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 46 520 IPR010061 GO:0004491
Trre7g05066 539 CDD ALDH_F6_MMSDH 44 520 IPR010061 GO:0004491
Trre7g05066 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Trre7g05066 539 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 48 295 - -
Trre7g05066 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 497 IPR016162 GO:0016491
Trre7g05066 539 Pfam Aldehyde dehydrogenase family 54 516 IPR015590 GO:0016491
Trre7g05066 539 SUPERFAMILY ALDH-like 39 518 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05066 Trre-Chr7 57531605 57536232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05066 4 504 Aldehyde Dehydrogenase Gene Family AT2G14170 78.044 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05066 K00140 - gmx:100811544 956.822