Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05057 ATGCATTTTCATTCATTCAAGGAGGAAGCTTTGAATGATTATAAGAAGACAAAGCTGGCTACCACACTATCTTGGAGGCATTCTGCCAACAATGGCAGCAGCCATGCTTCCACTGATCTGGAAAGGAATGGCGATGGGAAGGCTCAAGATTCAGAGCCTCCAACTCCACATTCTGTTATGAAGATGGGATTGAGAGATCGTAGTAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGCCAGAGCTCGTCTTCTGTGCACGAGAAAGAGTATTCCTTAAGGCAGTTAATGGATCTTATAGATATGCGTGAAAATGCATTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGTTCGTTGAATGTGAAGATCCAGGCAGCAACTGTTTTGGGTTCACTTTGCAAAGAAAATGAGCTGAGGGTAAAAGTTTTGCTTGGTGGATGTATTCCTCCATTGCTTGGTCTGCTAAAGTCAAGTTCTACCGAAGGTCAAATTGCTGCTGCAAAGACTATATATGCTGTCTCTCAAGGTGGGGTGAAAGATCATGTTGGTTCCAAAATATTTTCAACCGAAGGAGTAGTACCAGTGCTTTGGGAGCAGTTGCGAACTGGTCTGAAAGCTGGAAATGTCGTTGAAAGTTTACTGACGGGAACATTGAAAAATCTCTCCAGCAATGCTGAGGGATTCTGGAATGCAACAATTCAAGCCGGAGGAGTGGACATATTAGTGAAGTTATTGGCAACAGGGCAGCCTAGCACTTTAGCTAATGTTTGCTTTTTGCTTGCTGCTGCAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGAATGCAGAGGTGACTAAACAACTCTTGAAACTATTAGGCCCTGGCAATGATGACCTCGTTAGATCTGAAGCAGCTGGTGCTCTTAAATCTCTATCTGCTCAATGCAAAGAGGCGAGGCGGGAAATAGCCAGTTCTAATGGCATTCCTGCTTTGATCAATGCTACTATAGCTCCTTCTAAAGAGTACATGCAAGGTGAGTGTGCTCAAGCATTACAAGAAAATGCTATGTGTGCTTTAGCAAACATCTCTGGTGGTTTGTCTTATGTCATATCTAGCCTCGGTCAAAGCCTTGAATCATGCTCTTCCTCTACCCAAATTGCTGACACTTTAGGAGCTATAGCATCAGCTCTTATGATATATGATAACAAGGCAGAATCTACCAAACCATCAGATCCTTTGGTGGTTGAACAGACACTACTGAAACAATTCAAACCGCGCTTGCCCTTCCTTGTGCAAGAACGGACCATTGAAGCTCTAGCTAGTTTGTACGGCAATCCCATACTCTCGGCTAAACTAGCAAATTCTGATGCAAAACATTTGCTCGTTGGTCTGATAACAATGGCTTCCAATGAAGTGCAAGAGGAGCTTATAAAAGCTCTTTTGACACTGTGCAAAAGTGAAGGCAGCCTATGGCGCGCACTTCAGGGACGTGAAGGAATTCAGCTATTGATATCTCTTCTTGGTCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCCTTGCTTTGCCTTTTATCAAATGAAAATGATGAAAGTAAATGGGCAATTACTGCTGCTGGTGGTATACCTCCACTTGTTCAAATTTTGGAAACAGGATCTGCAAAAGCAAAGGAAGATTCGGCAAGAATCCTTAAGAACTTGTGCAATCATAGTGAAGATATACGTGCTTGCGTTGAAAGTGCAAATGCTGTTCCTGCGTTGTTGTGGCTATTGAAGAATGGAAGTCCTAATGGGAAGGATATTGCAGCAAAGACCATAAATCATTTAATTCATAAATCTGATACTACGACTATCAGTCAGCTTACAGCCTTATTGACAAGTGACCTTCCTGATTCCAAGATATATGTTTTGGATGCTTTGAGAAGTATGCTTTGTGTTGCTCCACTTAGCGACATTTTACGCGAAGGTAGTGCTGCTGGGGATGCATTTGATACTATGATAATGTTATTGAGCTCTACCAAGGAAGAAACTCAGGCAAAATCTGCGTCAGCTCTGGCCGAAATTTTTGAAGCAAGGAAAGATTTGCGTGAAAGTAGCATTGCCATCAAAGCTCTTTGTTCAGCCATGAAATTGCTTAATGTTGAATCTGAAAGTATCCTGATGGAGTCCTCAAACTGCCTGGCTTCAATATTTCTTTCCATCAAAGAGAACAAGGATGTAGCAGCTGTTGCTAGAGATACATTATCGCCGCTAGTTACACTAGCTAACTCTTCGATTTTGGAAGTGGCAGAAATGGCTATAGGTGCTGTAGCAAATCTTATTTTGGATATTGACATAGCAAAGAAAGTTGCTGCAGAAGAAGTTATCTTGCCGGCTACTAGAGTATTGAAAGAAGGCACAATTTCTGGAAAAACTCATGCTGCAGCAGCAATTGCTCGCCTTTTACATTCTCATAAAGTTGATAATGTTGTTACTGATTGTGTGGATCGTGCCGGAACTGTTCTTGCATTAGTTTCTTTTTTGGATTCTTCTGTCAATGGATCTATTGACACATCAGAGGCTTTAGAAGCCCTTGTCATTCTGTCCAGGTCAGAAGAGACTGGCGCAAATATTAAACCAGCATGTGCAATTTTGGCTGAATTCCCTGAAAGCTTAATCCCAATAGTCCTGTGCATTGCTAATTCAACACCGACATTGCAAGATAAAACAATCGAGATTTTATCTCGATTATGTAAAGATCAGCCTATTGTTTTAGGAGATAGTGTTGTTTCTGCCTCTGGATGTATATCTTCAATAGCTAAAAGGATAATCAGTTCCACTAATGTGAAGGTTAAAATTGGTGGTGTTGCACTCCTTATTTGTGCTGCAAAAGCAAATCATCAGAGACTAGTGGAGGATCTTAATCTATCAAACTTGTCTGTTAACCTTATTCAGTCTCTAGTTGAAATTCTTATTTCTGCACAGTCTTCTTTGGGTAATAGCGGGGATGATGATGACAAAGAATCCATCAGCATATGCAGGCATGCAAAAGAAGAGGCTAACGGCCGTGAATCCAAAACTGGAACTTCCATTATATGCGGTGTTGACTTAGCTATATGGTTACTGTCTATTCTTGCTTGTCATGACGGAAAAAATAAAAATGCAATAATGAAGGCTGGAGCAATTGATGCCGTCACCGACAGGATCTCAAATTGTTATTCACAATATTCTCAGATTGAATACAAAGAAGATAACAGCACGTGGATTTGTGCCTTGTTGTTGGCAATCTTATATCAAGATAGAGATATCATACGGGCACATGCAACCACAAAGTCTGTACCAGCACTTGCCAATTTATTGAAGTCAGACGAAACCGAGAACAAATATTTTGCTGCACAATCAATAGCGAGCCTTGTTTGTAATGGTAACAGGGGAACACTTCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACCGATATACAAGAACTTCTTGAAATGTCCGAGGAATTTTCTTTAGTGCGTTATCCTGATCAAGTGGCTCTAGAGAGGTTGTTTAGAGTTGATGATATAAGAGTTGGCGCCACTTCTCGTAAGGCAATACCAGCCCTAGTTGATCTTCTCAAACCAATTCCAGATCGCCCAGGTGCACCATTTTTAGCTCTCGGGCTTTTAACTCAACTTGGTAGAGATTGTCCGTCAAATAAAACTATAATGGTAGAATCCGGGGCGTTAGAGGCTCTTACGAAGTATCTTTCCCTTGGTCCACAAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTAGTAGTGCTGATATACGAAAACACGACTCTGCATTTGGCGCTGTTAATCAACTTGTAGCTGTCCTACGTTTAGGAGGAAGGGGTGCAAGGTATAGCGCTGCAAAAGCTTTGGAAAGTTTATTCTCTGCAGACCATATTAGAAACGCTGAGATTGCTCGCCAAGCTGTTCAACCCTTGGTAGAAATTCTTAGTACTGGTTCAGAAAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTGGGTTACTGAGTGAAAATACATCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCTGTGGATGTTCTTTATAAGATCCTTTCGTCAAATTGTTCAACGGACCTCAAAGGGGATGCTGCTGAATTATGTTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACGATGGCTGCTGCACGATGCATTGAACCACTAGTCTCTCTCCTTGCAACCGAGTTTAGTTCTGCTCATCATTCAGTTGTTCGGGCATTGGATAGGCTTGTTGATGACGAGCAACTGGCTGAATTAGTTGCTGCAAATGGTGCAGTTATTCCTCTTGTTAGTCTACTGTCTAGTAGAAACTATGTACTTCACGAGGCCATTTCCAGAGCTTTGGTCAAGTTAGGAAAAGACAGACCTGCTTGTAAAATGGAAATGGTAAAAGCTGGAGCCATTGAAAGAATACTAGACATGTTACATGAAGCACCTGATTTTTTGTGCGCAGCTTTTGCAGAACTGTTGCGTATATTAACCAATAATGCTACCATAGCTAAAGGACCATCGGCCGCTAAAGTTGTTGAACCCTTGTTTTTGTTGTTGACAAGATATGATTTTGGGCCCGACGGACAGCACGGTGCAATGCAGGTTTTGGTTAATATCTTGGAACATCCAAAGTGTCGTGCTGACTATTCATTGACTTCTCACAAAGTTATTGAACCACTTATCCCTTTGCTTGATTCACCGATATCAGTAGTGCAACAGTTGGCTGCTGAGCTTCTTTCACATCTGCTCCTAGAAGAACATCTTCAAAAGGATCCGGTGACACCGAAAGTAATTGCCCCTCTTATAAGAATTCTCGGTTCTGGTATACCTTTATTGCAGCAGCGAGCTCTAAAGGCCCTAGTTAGTATTGCGCTAACATGGCCGAACGAAATTGCCAAAGAGGGTGGTGTTGTTGAGATTTCCAAAGTGATATTGCAAGCTGATCCATCCCTTCCTCATGCTTTATGGGAATCTGCTGCATCTGTCCTGTCAAGTATTCTGCAATTTAGCTCAGAATTCTACTTGGAAGTGCCTGTTGCTGTGTTGGTAAGGTTGCTTCGGTCAGGCTCAGAGAGCACAGTTATCGGTGCGTTAAATGCTCTTCTAGTTTTGGAAAGTGATGATGGAACTAGTGCAGAATCTATGGCTGATAGTGGTGCAATAGAGGCTCTCTTGGAGCTCCTAAGATCGCATCAGTGTGAGGAAGTCGCTGCGCGACTCTTAGAAGTATTGCTGAACAATGTAAAGATCAGAGAAACGAAAGTTACTAAGTCAGCCATCTTACCGTTATCACAATATCTATTGGACCCACAAACCCAAGCACAGCACGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTTTTCCAGAATGAGGCTCTTGCTCGATCTGGTGATGCAGTTTCTGCGTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCGACAGAAGAAATGAAAGTTGTAGCTATATGTGCTTTGCAAAATCTTGTGATGTACAGTCGACCAAATAGAAGAGCAGTTGCAGAGGCCGGTGGTGTTCAGGTTGTACTGGATCTGATAGGTTCAAGTAATCCTGAAACTTCTGTCCAGGCTGCAATGTTTATTAAACTTCTGTTCTCAAATAATACAATTCAAGAGTATGCTTCTAGCGAAACAGTCAGAGCAATTACTGCCACTATTGAAAAAGATTTATGGGCGAATGGAACTGTGAACGAGGAATATCTGAAAGCATTAAATTCTCTATTGAGCAACTTCCCACGACTGAGAGCAACCGAACCTGCGACACTTAGTATTCCCCATCTGGTAACATCCTTAAAGACAGGTTCAGAGGCTTGTCAGGAAGCTGCCTTAGATGCACTTTTTCTGCTCAGACAAGCTTGGTCAGCATGCCCTGCTGAAGTTTCAAGAGCTCAGTCAATTGCAGCTGCAGATGCTATTCCTTTCCTGCAGTACTTAATCCAGTCTGGTCCGCCTCGGTTTCAGGAGAAGGCGGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATCGTAAAGCGTGGTAACAATATGAGACAGTCTGTTGGAAACCCTAGTGTGTACTGCAAGATTACTCTTGGCAATAATCCACCGAGGCTAACCAAGGTGGTCTCAACTGGTCCCAATCCGGAGTGGGAAGAAAGCTTTACATGGTCCTTTGAGAGTCCACCAAAAGGCCAAAAACTACATATTTCTTGCAAAAACAAAAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTCGGAGCCGTAGCTGGTGAGTACACTCTGTTGCCTGCAAGTAAAAGTGGACCACCAAGGAATCTAGAAATTGAATTTCAGTGGTCTAACAAAGCAAGTGATACAACAACTGATACAGTTCAACAGTAG 6546 0.4258 MHFHSFKEEALNDYKKTKLATTLSWRHSANNGSSHASTDLERNGDGKAQDSEPPTPHSVMKMGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSVHEKEYSLRQLMDLIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLRTGLKAGNVVESLLTGTLKNLSSNAEGFWNATIQAGGVDILVKLLATGQPSTLANVCFLLAAAMMEDASVCSKVLNAEVTKQLLKLLGPGNDDLVRSEAAGALKSLSAQCKEARREIASSNGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCSSSTQIADTLGAIASALMIYDNKAESTKPSDPLVVEQTLLKQFKPRLPFLVQERTIEALASLYGNPILSAKLANSDAKHLLVGLITMASNEVQEELIKALLTLCKSEGSLWRALQGREGIQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSARILKNLCNHSEDIRACVESANAVPALLWLLKNGSPNGKDIAAKTINHLIHKSDTTTISQLTALLTSDLPDSKIYVLDALRSMLCVAPLSDILREGSAAGDAFDTMIMLLSSTKEETQAKSASALAEIFEARKDLRESSIAIKALCSAMKLLNVESESILMESSNCLASIFLSIKENKDVAAVARDTLSPLVTLANSSILEVAEMAIGAVANLILDIDIAKKVAAEEVILPATRVLKEGTISGKTHAAAAIARLLHSHKVDNVVTDCVDRAGTVLALVSFLDSSVNGSIDTSEALEALVILSRSEETGANIKPACAILAEFPESLIPIVLCIANSTPTLQDKTIEILSRLCKDQPIVLGDSVVSASGCISSIAKRIISSTNVKVKIGGVALLICAAKANHQRLVEDLNLSNLSVNLIQSLVEILISAQSSLGNSGDDDDKESISICRHAKEEANGRESKTGTSIICGVDLAIWLLSILACHDGKNKNAIMKAGAIDAVTDRISNCYSQYSQIEYKEDNSTWICALLLAILYQDRDIIRAHATTKSVPALANLLKSDETENKYFAAQSIASLVCNGNRGTLLSVANSGAAGGLISLLGCADTDIQELLEMSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLGRDCPSNKTIMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSADIRKHDSAFGAVNQLVAVLRLGGRGARYSAAKALESLFSADHIRNAEIARQAVQPLVEILSTGSEREQHAAIAALVGLLSENTSRALAVADVEMNAVDVLYKILSSNCSTDLKGDAAELCCALFGNTRIRSTMAAARCIEPLVSLLATEFSSAHHSVVRALDRLVDDEQLAELVAANGAVIPLVSLLSSRNYVLHEAISRALVKLGKDRPACKMEMVKAGAIERILDMLHEAPDFLCAAFAELLRILTNNATIAKGPSAAKVVEPLFLLLTRYDFGPDGQHGAMQVLVNILEHPKCRADYSLTSHKVIEPLIPLLDSPISVVQQLAAELLSHLLLEEHLQKDPVTPKVIAPLIRILGSGIPLLQQRALKALVSIALTWPNEIAKEGGVVEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAESMADSGAIEALLELLRSHQCEEVAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQHARLLATLALGDLFQNEALARSGDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRPNRRAVAEAGGVQVVLDLIGSSNPETSVQAAMFIKLLFSNNTIQEYASSETVRAITATIEKDLWANGTVNEEYLKALNSLLSNFPRLRATEPATLSIPHLVTSLKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPFLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIVKRGNNMRQSVGNPSVYCKITLGNNPPRLTKVVSTGPNPEWEESFTWSFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGAVAGEYTLLPASKSGPPRNLEIEFQWSNKASDTTTDTVQQ 2181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05057 2181 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 554 596 IPR000225 GO:0005515
Trre7g05057 2181 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1215 1259 IPR000225 GO:0005515
Trre7g05057 2181 Gene3D - 430 667 IPR011989 -
Trre7g05057 2181 Gene3D - 668 1027 IPR011989 -
Trre7g05057 2181 Gene3D - 67 429 IPR011989 -
Trre7g05057 2181 MobiDBLite consensus disorder prediction 25 39 - -
Trre7g05057 2181 SUPERFAMILY ARM repeat 1044 1179 IPR016024 -
Trre7g05057 2181 Gene3D C2 domain 2048 2179 IPR035892 -
Trre7g05057 2181 SUPERFAMILY ARM repeat 679 1082 IPR016024 -
Trre7g05057 2181 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 47 2170 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Trre7g05057 2181 Gene3D - 1542 1716 IPR011989 -
Trre7g05057 2181 Gene3D - 1033 1383 IPR011989 -
Trre7g05057 2181 Gene3D - 1811 2047 IPR011989 -
Trre7g05057 2181 SMART C2_3c 2050 2146 IPR000008 -
Trre7g05057 2181 SUPERFAMILY ARM repeat 1599 2045 IPR016024 -
Trre7g05057 2181 SMART arm_5 1331 1371 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1203 1246 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 329 378 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 286 327 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 751 789 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 154 194 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 585 625 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1876 1916 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1586 1626 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1749 1788 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 112 153 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1248 1289 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1458 1498 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1417 1457 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 543 583 IPR000225 GO:0005515
Trre7g05057 2181 SMART arm_5 1500 1540 IPR000225 GO:0005515
Trre7g05057 2181 SUPERFAMILY ARM repeat 74 706 IPR016024 -
Trre7g05057 2181 Pfam C2 domain 2049 2140 IPR000008 -
Trre7g05057 2181 Gene3D - 1717 1806 IPR011989 -
Trre7g05057 2181 MobiDBLite consensus disorder prediction 25 75 - -
Trre7g05057 2181 Coils Coil 315 335 - -
Trre7g05057 2181 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2049 2156 IPR035892 -
Trre7g05057 2181 CDD C2 2051 2141 - -
Trre7g05057 2181 SUPERFAMILY ARM repeat 1205 1585 IPR016024 -
Trre7g05057 2181 Pfam Armadillo/beta-catenin-like repeat 543 582 IPR000225 GO:0005515
Trre7g05057 2181 Pfam Armadillo/beta-catenin-like repeat 122 152 IPR000225 GO:0005515
Trre7g05057 2181 Gene3D - 1384 1539 IPR011989 -
Trre7g05057 2181 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1399 1633 - -
Trre7g05057 2181 ProSiteProfiles C2 domain profile. 2030 2147 IPR000008 -
Trre7g05057 2181 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2049 2170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05057 Trre-Chr7 57444773 57454363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05057 506 638 U-box Gene Family AT2G23140 40.000 5.54e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05057 - - cam:101494820 3784.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05057 7 57444773 57454363 Trre7g05057 7 57444773 57454363 ECH
Trre7g05057 7 57444773 57454363 Trre5g03422 5 30926584 30935978 PCT