Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05035 ATGAGAGCTTCTTCACCCACTCATGTCAAATCCACTCCTTCTTTGGCTGAAGAATACAACTCTTGGATTCTTCGCCATCCATCTGCATTAGACATGTTTGAACAAATCATGGATGCTTCAAAGGGAAAACAGATTGTTATGTTTTTGGACTACGATGGTACTCTGTCGCCTATAGTCGATGATCCCGACCGTGCTTTCATGTCTGATTCGATGAGGAAAACGGTTAGACAACTTGCAAGGTGTTTTCCTACTGCAATTGTTACCGGAAGATGCATAGACAAAGTGTACAATTTTGTTCGTTTGGCTGAACTATATTATGCTGGTAGCCATGGCATGGACATTAAAGGTCCAACAAAAGAGTCCAAATACAACAAAAATAAGAAAGCAGAGGAAATTCTTTTTCAACCTGCCAGAGAATTTGTTCCAATGATAAATGAGGTTTATGAACAATTGGTTGAGAAAACAAAATCAACTCTTGGTGCTAGAGTTGAGAATCACAAATTCTGTGCCTCTGTTCATTTTAGATGTGTTGAGGAAAAGAGATGGGTTGAATTGGCAGAGCAAGTAAAATCAGTGATAAAAGAGTACCCTAAGCTTCGTCTTACACAAGGAAGGAAGGTATTGGAGATTCGTCCCGCAATTAAATGGGACAAGGGCAAGGCCTTAGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTGTTTATATTGGAGATGATAGAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGAATTCTAGTCTCTAAATTTCCAAAGGACACTACTGCCTCATACTCCTTACAAGAACCCAATGAGGTTATGGATTTTCTTCAACGTTTAGTTGAATGGAAAAAAGTATCTTCAAGATCACGTTCACGGGTGTAG 921 0.392 MRASSPTHVKSTPSLAEEYNSWILRHPSALDMFEQIMDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRQLARCFPTAIVTGRCIDKVYNFVRLAELYYAGSHGMDIKGPTKESKYNKNKKAEEILFQPAREFVPMINEVYEQLVEKTKSTLGARVENHKFCASVHFRCVEEKRWVELAEQVKSVIKEYPKLRLTQGRKVLEIRPAIKWDKGKALEFLLESLGFANCNDVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTTASYSLQEPNEVMDFLQRLVEWKKVSSRSRSRV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05035 306 Pfam Trehalose-phosphatase 48 282 IPR003337 GO:0003824|GO:0005992
Trre7g05035 306 NCBIfam trehalose-phosphatase 43 293 IPR003337 GO:0003824|GO:0005992
Trre7g05035 306 Gene3D - 45 141 IPR023214 -
Trre7g05035 306 Gene3D - 142 305 IPR023214 -
Trre7g05035 306 SUPERFAMILY HAD-like 46 296 IPR036412 -
Trre7g05035 306 CDD HAD_TPP 46 286 - -
Trre7g05035 306 FunFam Trehalose 6-phosphate phosphatase 45 132 - -
Trre7g05035 306 NCBIfam HAD-IIB family hydrolase 47 258 IPR006379 -
Trre7g05035 306 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 302 IPR044651 GO:0004805|GO:0005992
Trre7g05035 306 FunFam Trehalose 6-phosphate phosphatase 143 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05035 Trre-Chr7 57245795 57249042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05035 41 292 Trehalose Biosynthesis Gene Families AT1G70290 26.740 6.02e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05035 K01087 - gmx:100794430 537.724