Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05030 ATGGAAGTTCTCAAAGATAGGTGCCTTATATTTATTTCAGAATATTATGAAGTTGGGATGCATGATCTAATAAAAGAAATGGGGCAAGATATTGTTCTGCTTGAAGACGATCCTAGAAAGCGTAGTCGATTATGGAAACCTAATGATATTTATGATGTTTTAAGTAAGAAGAAGGGAAAGGGAACAGATGCAATCAAGGGTATATTTCTAGACATGATGGAAATAAAGAAAATACAACTAGATGCTGATACATTCAATGAAATGCATAATCTTAGAATGATCATATTCCGTAATGATGACTCAAAGTCAAATGTGACCTGTTCGGATGATTTAAAATTTCCGAATAATTTAAAACTTCTATATTGGGATTGCTTCCCTCAAAGATCATTGCCGCAAGACTCTTGGCCAGAAAATCTCATTGCGGTTAAAATGCGTCACAGCCATCTTGAACAACTTTGGGAGGGAGATCTGGCTTTACCAAATTTGAAAATACTTGACCTTTCGTATTCTGAGAAGCTGAGAGCAATACCAGACCTCTCTTTGTGTCCAAATATTGATGAAATAAGGCTTTATCATTGTGAAAATTTGGAGGAGTTACCTGAAGTGAAGGAGGAGACTATGAAAAATCTAAAAAGGCTATGGTTAGGTGGAACAGCAATAAAAGAACTACCTTCATCCTTAGACCGTTTGGTTGGGCTTGAAGAACTGAGCTTGCTGGGTTGCAGAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTCAGTAAACTCGTCAGGTTAGACCTTTCCTATTGTTCAAATTTGGATGAGTTACCTGAAATCATGGAGACTATGGAAAATTTAGAAGTGCTCAACTTAGACGAAACATCAATAAAAGAACTACCTTCATCCTTACACCATTTGGTCGGGCTTGTAGAATTGAGCTTGGAAAGTTGCAGAAAGCTAAAGACTATTCCATCTTCCATTGGAAATCTCAGTAAACTCCTCAAGTTAAACCTTGCCGAGTGTGAATCACTTGAGACTTTTCCAGAAATACCAAATTACTGCTTGTCATCCTTGACTGAACTTTGGCTACAGGGAAGCAGTATTGTGAACCTTCCTGAGAGTATGGCTCATCTCTCAAGTTTGAAATTACTTTATTTAACCAATTGCAAATTGCTTGAATGTGTTCCAAAGCTTCCACCAAATCTAAGCGAAATTTGGGCATTAGATTGCCCTTCCATTAAGAGAATGATGCTAAGTTCAAGGTCTGATTCTGAAGAAGGTACCTTCCAATTTTATCTGACCAATAGTCAAGAACTAGATGCCACTTCTTGGAGTAATATTCGAGAGGAAGCATGTATTAAGATCAATGATCACGCATATCGGTCAGTGTTCTTCTGTTTTCCAGGGAGTGCAGTTCCTGACTGGTTCCTTTACAGTTGCAAGGGACATTCAGTAACTGTGAAAGAAGTCTCTCCAAATTTGTGCAGTAAAAATAGGCTTATTGGTTTTGCTCTGTGTGCTATTTGGAGACCAGGATATCATGGAGAACCTAAATACAAATTTGGATTTACATCAGATGGTAAAATATACTCTTCTGACCATAATATACCTGATATATTTGGCACTTTGAATTTGGATCACACATTTGGCACTTTGAATTTGGATCACACACTCCTATGGAAGCATCAATTAGACTTGGAAACAATTGGCAACAAGCTCTTTCATGCCCAAAACTTCACTTTTGAGTTTCCAGCAGATGTCAAAGTGAAAGAATGTGGAATATGTCCTCTGTATACCAAAAGAATTGATGATAATAGACTGACCAAAAGAAACAAGTGGGAGCAAAGCTGCAGAATAATTTAG 1848 0.3739 MEVLKDRCLIFISEYYEVGMHDLIKEMGQDIVLLEDDPRKRSRLWKPNDIYDVLSKKKGKGTDAIKGIFLDMMEIKKIQLDADTFNEMHNLRMIIFRNDDSKSNVTCSDDLKFPNNLKLLYWDCFPQRSLPQDSWPENLIAVKMRHSHLEQLWEGDLALPNLKILDLSYSEKLRAIPDLSLCPNIDEIRLYHCENLEELPEVKEETMKNLKRLWLGGTAIKELPSSLDRLVGLEELSLLGCRKLKTIPSSIGNLSKLVRLDLSYCSNLDELPEIMETMENLEVLNLDETSIKELPSSLHHLVGLVELSLESCRKLKTIPSSIGNLSKLLKLNLAECESLETFPEIPNYCLSSLTELWLQGSSIVNLPESMAHLSSLKLLYLTNCKLLECVPKLPPNLSEIWALDCPSIKRMMLSSRSDSEEGTFQFYLTNSQELDATSWSNIREEACIKINDHAYRSVFFCFPGSAVPDWFLYSCKGHSVTVKEVSPNLCSKNRLIGFALCAIWRPGYHGEPKYKFGFTSDGKIYSSDHNIPDIFGTLNLDHTFGTLNLDHTLLWKHQLDLETIGNKLFHAQNFTFEFPADVKVKECGICPLYTKRIDDNRLTKRNKWEQSCRII 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05030 615 Pfam Leucine Rich Repeat 138 155 IPR011713 -
Trre7g05030 615 Gene3D Ribonuclease Inhibitor 203 411 IPR032675 -
Trre7g05030 615 SUPERFAMILY L domain-like 70 436 - -
Trre7g05030 615 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 280 411 IPR044974 GO:0006952
Trre7g05030 615 SMART LRR_typ_2 207 230 IPR003591 -
Trre7g05030 615 SMART LRR_typ_2 350 373 IPR003591 -
Trre7g05030 615 SMART LRR_typ_2 301 325 IPR003591 -
Trre7g05030 615 SMART LRR_typ_2 159 183 IPR003591 -
Trre7g05030 615 SMART LRR_typ_2 278 300 IPR003591 -
Trre7g05030 615 Gene3D Ribonuclease Inhibitor 48 202 IPR032675 -
Trre7g05030 615 Pfam C-JID domain 462 596 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05030 Trre-Chr7 57161862 57164883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05030 4 420 WRKY Transcription Factor Family AT4G12020 34.339 6.33e-45 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05030 - - tpra:123916959 423.32