Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05026 ATGTCTCATCCAACAACTCCAAAGCATCAGAGACAGAGTTATGCAGATGATTTAGTTAAGCATCATCAACGATTTGGCGGCAAAGTGGATGCGTGGAAGGCTGCTCTAACCCAGGTAGCTGGACTCTCAGGCTGGGATTCACATGTAACAAGACCTGAAAGCACACTTGTTACAGAGATTGTGAAAGACATTGCGAAAAAATTGAAATGTTGTGTCTCAAGTGATTATGAAGGAATGACAGGAATTGACAACCATATTGAAAGTATTCAATCCTTGTTGCTCCTCGAGTCGCCGACTGTTCGAATCATAGGAATATGGGGCATGGGAGGGATAGGCAAAACAACAATTACCAATGCAATCTTTGAAAAACTTGCTACTCAGTTTAGTTCCAAAAGCATCATTCGAAATGTTCAACAAGAAATAGAAAGAGTTGGACTATCCCATGTAAAAAAAGAATACTTATCACAACTTCTAGATGAAAGAATTAAATCCTCTGAATCCAATTCTTACGATCAAAGGCTGAAACGGACAAAGGTTCTTCTTGTTTTTGATGATGTGAAAGATGCTGATCAACTTAAAGATTTGATTGGAACACATCATAAATTTGGCCAGGGGAGTAGAATCATTGTGACTAGTAGAGATAGGCAAGTGCTTGAGAATTCCAATGCTCACGAAATATATCAAGTTAGAGAAATGGATGATCAAGATTCTCTACAACTGTTCTGTTTATTTGCTTTTAAACAAAATCATCCAAAAGAATCTTTTGTGAGCTTAACAGAAAAGGTTTTAGATTATGCTAAAGGGCTCCCATTAGCTCTCAAAGTTTTGGGTTCAATGCTTTATGGCAAAGCAAATGAAGTATGGGAAAGTCAGCTGCAAAAGCTCGAAAAGCTTCCCGATCATGAAATTTTTAGATTGTTGAAATTAAGTTATGATGGACTTGACGACGAACAAAAAAATATATTTCTTGACATAGCTTGTTTCCATATAGGAGAATTGGAGAAAGTTGTAGCACAAATGTTGGATTGTTGTGGTTTCTCCACTCGCATTGGATTGGATGTTCTTGAAGATAGGTGCCTTATATCTATTTCAGAAGGTGAAGTTTGGATGCATGATCTAATACGAGATATGGGGCGTCAAATTGTTATGCTTCAATGTGTTGATAATCCTGGAAAACGTAGTCGATTATGGAAGGCTAGTGAAATTGACGATGTTTTAAGCAAGGGAAAGGGAACAGATGCAATCCGGTGTATATTCCTAAACATGGATGAAATATGGGAAAAGAAAGTTCAACTACATGTTGATACATTTAAGAAAATGCATAATCTTAGAATGATCAAGTTCCACAATCCCTTTACGATAAATAAGTCAAATGTAACCTTTCATGGATTCCTGAAGAGTTTTCCTAATGATTTAAAATTTCTTCAATGGGATGGCTACCCTCAAAGATCCTTGCCACAAGACTTTTGCCCAGAAAATCTTGTTACACTTGATATGTCTTATAGCCATCTTGAACAATTTTGGAAGGGGGATCAGGCTTTACCAAGTTTGAAAAGGCTTGACCTTAGTTATTCTAAGAAGCTGATAGCAGTTCCAGACCTCTCTTTCACTCCAAATATTGAAGAAGTAATTCTTAGTGGTTGTGTAAGTTTGACACAAGTTTACTCCTCTGGCTTCCTCAACAATCTTAACTTCTTACTTTTAGAAGGTTGTACCGAACTCAAGAGTTTAAATATTCGTAGCAATATTCTATCAAGATCATCTGGATTAGTTGCTCTCCGTGATTGTCATAAACTTGAAACACTTTTAATCAGCAGTAGAATTGATCATGTGGTTCAATCATATAAAAAATTTTATGGATATTCTAAGGTCGGAGATATGCACAAACTTTGTGATGAAATGGAAATAAAAATAGAGTTGAATGATGAAGGGGATTACGAGATTTGTGGATCATTTTCAGATACTCTTTCAGGAAAAAGAATCAATGATTTTTGTTGGTTAGATATTTCCAAATGTGAGTCCCTATCATGCCTACCAGCTGAACTTTTAAATTTGAAGTTTCTAACAGGACTTTCTCTTCGTGGTTGTTTAAAGTTGGAGTTACCTGAAATCAAGGAGACTATGGAAAATTTAAAAGTGCTCATCTTAGACGAAACATCAATAAAAGAACTACCTTCATCCTTGTACAATTTAGTTGGGCTTGAAAAATTGAGCTTGCAAAGTTGCACAAAGCTTAAGACTATTCCATCTTCCATTGGAAACTTCGGTAAACTCAAGTTAAACCTTACCTATTGTGAATCACTTGAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTTGGCAAAACTCAATTTAGAAGGTTGCTCGATGCTTGCGACCTTTCCAGAGATCTTGGAGCCTGCAGAAAGTTTTACTTGCATTGACTTAACAGACACAGCAATAAAAGAACTACCTTCATCCCTGCACCATTTGGTCGGGCTTAAAGAATTAAGCTTGCAAAGTTGCACAAAGCTTAAGACTATTCCTTCTTCTATTGGAAACCTCAGTAAACTCCTCAAGTTAAAACTTGCCTACTGTGAGTCACTTGAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTTGACAAAACTTGATTTCCAGGGTTGCTCAATGTTCAGGACCTTTCCTGAAATACCAAATGACATTGGCCGCTTGTCATCCTTGACTGAACTTTCATTGAAAGGAAGTAGTATTGTGAACCTTCCTGAGAGTCTGGCTCATCTATCAAGTTTGAAATCACTTAATTTAAGTGATTGCAAATTGCTTGAATCTGTACCAAAGTTTCCACCAAATCTAAAGAAAGTTTTTGCATTTGATTGCCCTTCCATTAAGAGAATGGTGCTAAATTCAAGGTCTGATTATGAAGAAGATACCTTCAAATTTCATCTGACCAATAGTCAAGAACTAGATGCTACTTCTTTGAGGAATATTGAAGAGGAAGCATATATTAAGATCAACGATGATGCATATAGGTCAGTGATCTTCTGTTTTCCAGGAAGTGCTGTTCCTGATTGGTTCCCTCACCGTTGCCAGGGACATTCAATAACTATAAGAAACGATGATTTAAATTTGTACGGGAGAAACAGGCTTATTGGTTTCGCTCTATGTGTGGTTTTGGGAGATGATTTTCCATACAAATTCTTTTGTCTCAATCCCAGAGTACCGTATTACTATGGTGTTGGCTTTAGATACAAATTAAAATTTGAATCTGATGGTCAAACATACTTTCATCCCGACAACAAGCTTGAAGTTGAATATTATGATTGGAAAGATCGATATAGAATATTTGCCCAACATCACACATTCCTGTGGAAGTATGAATTGGACTTGCCAAGAATTGATGTCGAGACTATCACTTTTGAGATCGTAGATGAGCATCGTCGTCCCTTAAGTTTTCCAACAACCATGACGGTGAAAGAATGTGGAATATGTCCTCTGTATATCAAAGAACCAAGTGGGGATGCAGTGTGTTCGGTAGACCCCTCCTCAAGTGACAACTACACACAATAA 3549 0.3694 MSHPTTPKHQRQSYADDLVKHHQRFGGKVDAWKAALTQVAGLSGWDSHVTRPESTLVTEIVKDIAKKLKCCVSSDYEGMTGIDNHIESIQSLLLLESPTVRIIGIWGMGGIGKTTITNAIFEKLATQFSSKSIIRNVQQEIERVGLSHVKKEYLSQLLDERIKSSESNSYDQRLKRTKVLLVFDDVKDADQLKDLIGTHHKFGQGSRIIVTSRDRQVLENSNAHEIYQVREMDDQDSLQLFCLFAFKQNHPKESFVSLTEKVLDYAKGLPLALKVLGSMLYGKANEVWESQLQKLEKLPDHEIFRLLKLSYDGLDDEQKNIFLDIACFHIGELEKVVAQMLDCCGFSTRIGLDVLEDRCLISISEGEVWMHDLIRDMGRQIVMLQCVDNPGKRSRLWKASEIDDVLSKGKGTDAIRCIFLNMDEIWEKKVQLHVDTFKKMHNLRMIKFHNPFTINKSNVTFHGFLKSFPNDLKFLQWDGYPQRSLPQDFCPENLVTLDMSYSHLEQFWKGDQALPSLKRLDLSYSKKLIAVPDLSFTPNIEEVILSGCVSLTQVYSSGFLNNLNFLLLEGCTELKSLNIRSNILSRSSGLVALRDCHKLETLLISSRIDHVVQSYKKFYGYSKVGDMHKLCDEMEIKIELNDEGDYEICGSFSDTLSGKRINDFCWLDISKCESLSCLPAELLNLKFLTGLSLRGCLKLELPEIKETMENLKVLILDETSIKELPSSLYNLVGLEKLSLQSCTKLKTIPSSIGNFGKLKLNLTYCESLETFPSSIFKLKLAKLNLEGCSMLATFPEILEPAESFTCIDLTDTAIKELPSSLHHLVGLKELSLQSCTKLKTIPSSIGNLSKLLKLKLAYCESLETFPSSIFKLKLTKLDFQGCSMFRTFPEIPNDIGRLSSLTELSLKGSSIVNLPESLAHLSSLKSLNLSDCKLLESVPKFPPNLKKVFAFDCPSIKRMVLNSRSDYEEDTFKFHLTNSQELDATSLRNIEEEAYIKINDDAYRSVIFCFPGSAVPDWFPHRCQGHSITIRNDDLNLYGRNRLIGFALCVVLGDDFPYKFFCLNPRVPYYYGVGFRYKLKFESDGQTYFHPDNKLEVEYYDWKDRYRIFAQHHTFLWKYELDLPRIDVETITFEIVDEHRRPLSFPTTMTVKECGICPLYIKEPSGDAVCSVDPSSSDNYTQ 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05026 1182 Gene3D Ribonuclease Inhibitor 414 630 IPR032675 -
Trre7g05026 1182 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 602 IPR044974 GO:0006952
Trre7g05026 1182 Pfam NB-ARC domain 83 297 IPR002182 GO:0043531
Trre7g05026 1182 Gene3D - 2 69 IPR035897 -
Trre7g05026 1182 Gene3D Ribonuclease Inhibitor 647 796 IPR032675 -
Trre7g05026 1182 Gene3D - 231 315 IPR042197 -
Trre7g05026 1182 SUPERFAMILY L domain-like 433 606 - -
Trre7g05026 1182 FunFam Disease resistance protein (TIR-NBS-LRR class) 233 315 - -
Trre7g05026 1182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 325 IPR027417 -
Trre7g05026 1182 Gene3D - 70 229 IPR027417 -
Trre7g05026 1182 SUPERFAMILY L domain-like 663 956 - -
Trre7g05026 1182 PRINTS Disease resistance protein signature 512 528 - -
Trre7g05026 1182 PRINTS Disease resistance protein signature 102 117 - -
Trre7g05026 1182 PRINTS Disease resistance protein signature 173 187 - -
Trre7g05026 1182 PRINTS Disease resistance protein signature 266 280 - -
Trre7g05026 1182 Pfam C-JID domain 1010 1164 IPR045344 -
Trre7g05026 1182 SUPERFAMILY "Winged helix" DNA-binding domain 302 406 IPR036390 -
Trre7g05026 1182 Gene3D Ribonuclease Inhibitor 797 1001 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05026 Trre-Chr7 57129288 57134786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05026 847 978 WRKY Transcription Factor Family AT4G12020 31.655 2.51e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05026 - - tpra:123916959 1694.09