Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05025 ATGTCTGTTCCAAAGCATCAGAGACAGAGTTATGCAGACGATTTAGTTAAGCATCATCCACGATTTGGCGGCAAAGTGGATGCGTGGAAGGCTGCTCTAACCCAAGTAGCTGGACTCTCAGGCTGGGATTCACAAGTAACCAGAGCAGAAAGCACACTTGTTACGAAGATTGTGAAAGATATTTTGAGAAAATTGAATCGATGTTTCTTAAGTGATCATCAAGGAATTGTTGGAATTGGAAAGCACATTGAACTAATCCAATCCTTGTTGCTTCTCGAGTCGGCAGCTGTTCGTAAAGTTTGGATGCATGATCTAATACAAGAAATGGGCCATGAAATTGTTAGGCTTCAATGTGTCGATGATCCTGGAAAACGTAGTCGATTATGGAAGCCTGATGATATTTATGATGTTTTAAGTAAGAACAAGGGAAAGGGAACCAATGCAACCCAGTGCATACACCTGGACTTATGCAAAATAAAGAAAGTTCAACTGCATGCTAAAACTTTTAAGAAAATGCATAATCTTAGAATGATCCATTTCTTTAAATCCGATGGATTTGAGGGTGACTCAAATGTGATCATTCATGTGTTTTCTAAGAGTTTTCCGGATCATTTAAAATTTCTTTGTTGGGATGAATTCCCTCAAAGATCTTTACCGCAAGACTTTTGCCCAGAAAATCTTGTTATACTTGAAATGCCTTTTAGCGATCTTGAACAACTTTGGGAGGGGGATAAGGCTTTACCAAATTTGAAAAGGCTTAACCTTAGTGAGTCTGAGAAGCTGATAGAAGTACCAGACCTCTCCTTGTCACCAAATATTGAAGAAATAATTCTTAGTGATTGTGTAAGTTTGGTACACGTTTACTCCTCTAGCTTCCTCAACAAACTTAACCAGTTATGTTTAGATGGTTGTACCAAACTCAAGAGTTTAAATATTCCTAGCAATATTCTATCGAGATCATCTGGATTAGTTGCTCTCCATGATTGTCACAACCTTGAAACGATTTTAATCAGCGGTAGAACTAATCAAGTGGTTCAATCAATCAAATGGTCTTATGTTTATGGATATTTGCACTACAACTCAATACGTGTTTTTCATGATACAATAACACAAATGTCGAATGATGAGGGAGGTTACATGTTTTGGGAAAACCATTCAATTACTTTTACAAGTATCAATGAGCTTTGTTGGTTAGATATTTCGAATTGTGAGTCCCTGACATACCTACCAGCTGAACTTTTAAATTTGAAGTTTCTAAGAAGACTTTGTCTCCGTGGTTGTTCAAAGTTGAAGGAGTTACCTGAAATTGAGGAGACTATGGAAAATCTTAAAGTGCTCATCTTAGACAAAACAGCAATAAATGAACTACCTTCATCCTTGCACCGCTTGATCGGGCTTGAAGAATTAAGTTTCCAAAGTTGCACAAGGCTTAAGATTATTCCAAACAACATTGTTGACCTATATCTTCTATCCCGACTTGATTGTTCTGGTTGTTGTAGATTAACAGAAATCCCGAAAAACATTGGCCGCATGTCATCCTTGACTAAACTTTCACTGCAAGGAAGCAGTATTGTGACCCTTCCTGAGAGTATGGCTTCTCTTTCAAGTTTGAAATCACTTAATTTAAGTGATTGCAAATTGCTTGAATGTATCCCAAAGCTCCCACCACATGTAAATCATTTGTTTGCATTTGATTGTCCTTCCATTAAGAGAGTGGTGCCAAATTCAAGGTTGGAACTCATGTCTGATTCGAAAGAAGATACCTTCGAATTTCATCTCACGAATAGTCAAGAACTAGATTCATCTTTTTGGAGTAATATTGGAGACGAAGCATGTATTAAGATCACTGAAGATGCTTATGGTTCAGTGATCTTTTGTTTTCCAGGGAGTGCAGTTCCTTGCTGGTTCCATTACAGTTGCCAGGGACATTCAGTAACCATGAAAAAAGATTCTCCAAATTTGTGCAGTAAAAATAGGCTCATTGGTTTTGCTCTGTGTGTTATTTTGGGACATGAAAAGAAGCAGAAGCTTGACATATACAAATTAGGATTTGAATACGATGGTCAACGACCACACTTTTTTTACGACCATTTGCCTATGCACTATTTGAATTGGAAGGGTCGCGATAGGTTTATCATCCAAGATCACACATTTCTATGGAAGTATCAATTCGACTTAGCAAGCATTGGCAACAAGCTCTTTCATGCCCACAGCTTCACTTTTGAGATCCTAGATGAGCAATTTCGTCCCTTAAATTTGCAATCAACCTTCACGGTGAAAGAATGTGGATTATGTCCTTTGTATACCAAAGAAAACGATGATAATGGCATTGAAGAACCGAGTGGGAGCAGAGCTGCACAATAA 2364 0.3794 MSVPKHQRQSYADDLVKHHPRFGGKVDAWKAALTQVAGLSGWDSQVTRAESTLVTKIVKDILRKLNRCFLSDHQGIVGIGKHIELIQSLLLLESAAVRKVWMHDLIQEMGHEIVRLQCVDDPGKRSRLWKPDDIYDVLSKNKGKGTNATQCIHLDLCKIKKVQLHAKTFKKMHNLRMIHFFKSDGFEGDSNVIIHVFSKSFPDHLKFLCWDEFPQRSLPQDFCPENLVILEMPFSDLEQLWEGDKALPNLKRLNLSESEKLIEVPDLSLSPNIEEIILSDCVSLVHVYSSSFLNKLNQLCLDGCTKLKSLNIPSNILSRSSGLVALHDCHNLETILISGRTNQVVQSIKWSYVYGYLHYNSIRVFHDTITQMSNDEGGYMFWENHSITFTSINELCWLDISNCESLTYLPAELLNLKFLRRLCLRGCSKLKELPEIEETMENLKVLILDKTAINELPSSLHRLIGLEELSFQSCTRLKIIPNNIVDLYLLSRLDCSGCCRLTEIPKNIGRMSSLTKLSLQGSSIVTLPESMASLSSLKSLNLSDCKLLECIPKLPPHVNHLFAFDCPSIKRVVPNSRLELMSDSKEDTFEFHLTNSQELDSSFWSNIGDEACIKITEDAYGSVIFCFPGSAVPCWFHYSCQGHSVTMKKDSPNLCSKNRLIGFALCVILGHEKKQKLDIYKLGFEYDGQRPHFFYDHLPMHYLNWKGRDRFIIQDHTFLWKYQFDLASIGNKLFHAHSFTFEILDEQFRPLNLQSTFTVKECGLCPLYTKENDDNGIEEPSGSRAAQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05025 787 Gene3D Ribonuclease Inhibitor 354 570 IPR032675 -
Trre7g05025 787 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 392 570 IPR044974 GO:0006952
Trre7g05025 787 Gene3D - 1 71 IPR035897 -
Trre7g05025 787 Pfam BspA type Leucine rich repeat region (6 copies) 272 362 IPR026906 -
Trre7g05025 787 Pfam Leucine Rich Repeat 226 245 IPR011713 -
Trre7g05025 787 Gene3D Ribonuclease Inhibitor 137 353 IPR032675 -
Trre7g05025 787 Pfam C-JID domain 627 771 IPR045344 -
Trre7g05025 787 SUPERFAMILY L domain-like 102 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05025 Trre-Chr7 57118267 57123660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05025 389 552 WRKY Transcription Factor Family AT4G12020 30.952 2.44e-06 49.7