Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05021 ATGGACAAGCATATTGAAAATCTCCAATCCTTGTTGCAACTTGAGTCGCCGACTGTTCGTATCATAGGAATATGGGGCATGGGAGGGATAGGGAAAACAACAATTGCAAATGCAATCTTTGAAAAACTCGCAATTGATTTCAGTTCCAGCAGCAAAGTTCTAAATGTTCAAGAACAAATAGAAAGAGCTGGAGTAGACCATGTAAAAAGAAAATACTTAAAAGAACTTCTAAAGGAAGACAATGACATTACATCCTGTAACTATAATTTTTCATATCAAAGGCTGAAACGAACAAAGGTTCTTCTTATTCTTGATGATGTTAAAGATTTTGATCAAGATTTAATTGGAACACATAGTAACTTTGGGGAGGGGAGTAGAATCATTGTGACTAGTAGAGACAAGCAAGTGCTTCAGAATGCCAATGCTGATAAAATATATCAAGTTAGTGAAATGAATGATCAAGATTCGCTAGAACTCTTCTGTTCATTTGCCTTTAAACAAAAACAACCGATTGAATCTTATGTGAGCTTAACAGAAAAGTTTTTAAAATATGCTGATGGGCTTCCTTTAGCTCTCAAAGTTTTGGGTAAATTGCTTTGTGGAAAAACAAAAGAAGTATGGAAAAGTCAGCTGCAAAGGCTCGAAAAGCTTCCCGATCAAGATATTTTAAAACCGTTGATGTTAAGTTATGATGGTCTTGACAAGGAACAAAAAGATATATTTCTTGACATAGCTTGTTTCCATATAGGAAAATTTGGGAAAGCTGTAGAACAGATGTTGGATGGTTGTGGTTATTCTGCTGCTCGCATTGGAATGGAAGTTCTCAAAGATAGGTGCCTTATATTTATTTCAGATGGTGATATTTGGATGCATGATCTAATAAAAGAAATGGGGCAAGCAATTGTTCTCCTTGAAGACGATCCTAGAAAGCGTAGTCGATTATGGAAAACTAATGATATTTATGATGTTTTAAGTAAGAAGAAGGTATGTTCTTTAGCCCCCTCAAATTTCAATTGA 1017 0.351 MDKHIENLQSLLQLESPTVRIIGIWGMGGIGKTTIANAIFEKLAIDFSSSSKVLNVQEQIERAGVDHVKRKYLKELLKEDNDITSCNYNFSYQRLKRTKVLLILDDVKDFDQDLIGTHSNFGEGSRIIVTSRDKQVLQNANADKIYQVSEMNDQDSLELFCSFAFKQKQPIESYVSLTEKFLKYADGLPLALKVLGKLLCGKTKEVWKSQLQRLEKLPDQDILKPLMLSYDGLDKEQKDIFLDIACFHIGKFGKAVEQMLDGCGYSAARIGMEVLKDRCLIFISDGDIWMHDLIKEMGQAIVLLEDDPRKRSRLWKTNDIYDVLSKKKVCSLAPSNFN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05021 338 Gene3D - 150 234 IPR042197 -
Trre7g05021 338 PRINTS Disease resistance protein signature 94 108 - -
Trre7g05021 338 PRINTS Disease resistance protein signature 21 36 - -
Trre7g05021 338 PRINTS Disease resistance protein signature 185 199 - -
Trre7g05021 338 Pfam NB-ARC domain 2 216 IPR002182 GO:0043531
Trre7g05021 338 SUPERFAMILY "Winged helix" DNA-binding domain 222 324 IPR036390 -
Trre7g05021 338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 244 IPR027417 -
Trre7g05021 338 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 324 IPR044974 GO:0006952
Trre7g05021 338 Gene3D - 1 146 IPR027417 -
Trre7g05021 338 FunFam Disease resistance protein (TIR-NBS-LRR class) 152 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05021 Trre-Chr7 57076839 57077855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05021 19 328 WRKY Transcription Factor Family AT5G45050 33.651 2.17e-49 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05021 - - tpra:123916959 424.861