Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05019 ATGTTCCGTAATATTAACTACTTAATTGACTCAAACTCAAAGTCAAATGTGACCTGTTCGGATGATTTAAAATTTCCGAATAATTTAAAACTTCTATATTGGGATTGCTTCCCTCAAAGATCATTGCCGCAAAACTTTTGGCCAGAAGATCTCATTGTGGTTGAAATGCGTAACAGCCATCTTGAACAACTTTGGGAGAGAGATCAGGTTTTACCAAATTTGAAAAGGCTTGACCTTAGTTATTCTAGTAAGCTGATAGCACTTCCAGATCTCTCTTTCTCTCCAAATATTGAAGAAGTACATCTTAGTGGTTGTGAAAGTTTGACACAAGTTAACTCCTCTTGCTTCCTCAAAAATCTTAACCTCTTACTTTTAGAAGGTTGTACCGAACTCAAGAGTATAAATATTCCTAGCAATATTCTATCAAGATCATATGGATTCGTTGGTCTCCGTTATTGTCATAACCTTGAAACACTTTTAATCAGCAGCAGAATTGATCATGTGGTTCAATCATATAAATCTTTTTATGGATATTCTATGGTCCAAGTAACGCAAAATTTTTCTTGTGAAATGGGAATAGAGTTACAGTTGAATGATGAAGGGGATTATGAGATTTGGGAATCATTTTCAGACACTCTTTCAAGAAAAAGAATCAATGAGTTTTGTTGGTTAGATTTTCGAATTTTGGAGGAGTTACCTTCATCCTTGCACCTTTTGGTCGGACTTGAAGAATTGAACTTGCAAGGTTGCACAAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTTAGGAAACTCCTCAAGTTAAACCTTGCCTTTTGTGAATCACTTGAAACTTTTCCGAGCAGCATTTTCAAATTGAAGTTGACAAAACTCGATTTTCATGGTTGCTCAATGCTTGCGACCTTTCCAGAGATCTTGGAGCCTGCAGAAAGTTTTACTCGCATTGACTTAACAGGCACAGCAATAAAAGAACTACCTTCATCCCTGCACCTTTTGGCCGGGCTTGAAGAATTGATATTGCGAGGTTGCACAAAGTTTAAGACTATTCCATCTTCCATTGGAAATCTCAGTAAACTCCTCAAGTTAGACCTTGCCAACTGTAAGTCACTTGAAACTTTTCCAAGCAGCATTTTTAAATTGAACTTGACAAAACTCGATTTCCCATTTTGCTCAATGCTTGGGACCTTTCCAGAAATACCAAATGACATTGGTTGCTTGTCATCCTTGACTGAACTTTCACTGAAAGGAAGCAGTATTGTGCACCTTCCTGAGAGTTTGGCTCATCTATCAAGTTTGAAATCACTTGATTTAAGTGATTGCAAATTGCTTGAATGTGTTCCAAAGCTACCACCAAATCTAAACCAAGTTTTGGCATATGATTGCCCTTCCATTAAGATAATGATGCTAAACTCAAGGTCTGATTCCGAAAAAGGTAGCTTCAAATTTCATCTGACCAATAGTCAAGAACTAGATGCTACTTCTTTGAGTAATATTGAAGATGAAGCATATATTAAGATCAATGGTGATGCATATCGGTCAGTGTTGTTCTGTTATCCAGGAAGTGCGGTTCCTGATTGGTTCTATCACCGATGCCAGGGACATTCAATAACTATAAGAAACGATCATTTAAATTTCTACGGGAGAAACAGGCTTATAGGTTTCGCTCTGTGTGTGGTTTTGGGACCTGACTTTCCATACACATTCTCTTGGTTAGATGTTGACGTTACATACGAATTAAAATTTGAATGTGATGGTCAAACACACTTTCATCCCATCAAGCTTGAATTTGAATGTGATGATTATTTTATAAGATTTGCACAAAATCACACATTCCTATCGAAGTATGAATTGACAAGAATTGGCAACTGGCCCTTTCGTGCCGAGACTATGACTTTTGAGATCGTAAGTTTTCCAAAATCCATAACAGTGAAAGAATGTGGAATATGTCCTCTGTATAGCAAAGAACCAAGTGGGGATGCAGTGTGTTCGGTAGACCCAGGGGCGGTGCTGTGCACCAAAATCAATAGCACCAATATGGAAGGGCCGCCGGAGAGGAGAGATGACCGTCGGGGAAGAGATAGACGGTCGCCGGGAGAGAAGGTTGTCGAGGGGAGAGAGATAGCCGCAGTCCACAGGAAAGAAAAAGTTGAATGA 2157 0.3866 MFRNINYLIDSNSKSNVTCSDDLKFPNNLKLLYWDCFPQRSLPQNFWPEDLIVVEMRNSHLEQLWERDQVLPNLKRLDLSYSSKLIALPDLSFSPNIEEVHLSGCESLTQVNSSCFLKNLNLLLLEGCTELKSINIPSNILSRSYGFVGLRYCHNLETLLISSRIDHVVQSYKSFYGYSMVQVTQNFSCEMGIELQLNDEGDYEIWESFSDTLSRKRINEFCWLDFRILEELPSSLHLLVGLEELNLQGCTKLKTIPSSIGNLRKLLKLNLAFCESLETFPSSIFKLKLTKLDFHGCSMLATFPEILEPAESFTRIDLTGTAIKELPSSLHLLAGLEELILRGCTKFKTIPSSIGNLSKLLKLDLANCKSLETFPSSIFKLNLTKLDFPFCSMLGTFPEIPNDIGCLSSLTELSLKGSSIVHLPESLAHLSSLKSLDLSDCKLLECVPKLPPNLNQVLAYDCPSIKIMMLNSRSDSEKGSFKFHLTNSQELDATSLSNIEDEAYIKINGDAYRSVLFCYPGSAVPDWFYHRCQGHSITIRNDHLNFYGRNRLIGFALCVVLGPDFPYTFSWLDVDVTYELKFECDGQTHFHPIKLEFECDDYFIRFAQNHTFLSKYELTRIGNWPFRAETMTFEIVSFPKSITVKECGICPLYSKEPSGDAVCSVDPGAVLCTKINSTNMEGPPERRDDRRGRDRRSPGEKVVEGREIAAVHRKEKVE 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05019 718 SUPERFAMILY L domain-like 217 465 - -
Trre7g05019 718 MobiDBLite consensus disorder prediction 681 718 - -
Trre7g05019 718 Pfam C-JID domain 519 657 IPR045344 -
Trre7g05019 718 MobiDBLite consensus disorder prediction 675 718 - -
Trre7g05019 718 Gene3D Ribonuclease Inhibitor 2 189 IPR032675 -
Trre7g05019 718 Gene3D Ribonuclease Inhibitor 205 303 IPR032675 -
Trre7g05019 718 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 288 385 - -
Trre7g05019 718 SMART LRR_typ_2 357 381 IPR003591 -
Trre7g05019 718 SMART LRR_typ_2 71 95 IPR003591 -
Trre7g05019 718 SMART LRR_typ_2 430 457 IPR003591 -
Trre7g05019 718 SMART LRR_typ_2 407 429 IPR003591 -
Trre7g05019 718 SMART LRR_typ_2 239 263 IPR003591 -
Trre7g05019 718 SUPERFAMILY L domain-like 9 163 - -
Trre7g05019 718 Gene3D Ribonuclease Inhibitor 304 506 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05019 Trre-Chr7 57060677 57064556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05019 336 448 WRKY Transcription Factor Family AT4G12020 36.842 1.23e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05019 - - tpra:123916959 772.696